Camelina sativa (false flax): 104711840
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Entry
104711840 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: beta-galactosidase 2
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00052
Galactose metabolism
csat00511
Other glycan degradation
csat00531
Glycosaminoglycan degradation
csat00600
Sphingolipid metabolism
csat00604
Glycosphingolipid biosynthesis - ganglio series
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
104711840
09103 Lipid metabolism
00600 Sphingolipid metabolism
104711840
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
104711840
00604 Glycosphingolipid biosynthesis - ganglio series
104711840
00511 Other glycan degradation
104711840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104711840
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
104711840
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104711840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
GHD
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
104711840
NCBI-ProteinID:
XP_010426910
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All DBs
Position
9:23112485..23117899
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AA seq
776 aa
AA seq
DB search
MHSGISVSLYISVHTASRSSFIPITDRADIFSRNFFTSFYKETKKTXKKMGLHFRDKAWI
FLAILCFSSLIYSIEAVVTYDHKALIINGQRSILLSGSIHYPRSTPEMWPDLIHKAKEGG
LDVIQTYVFWSGHEPSPGNYYFEDRYDLVKFTKLVHQAGLYLDLRIGPYVCAEWNFGGFP
VWLKYVPGIVFRTDNEPFKIAMQKFTKKIVEMMKEEKLFQTQGGPIILSQIENEYGPMQW
EMGAAGKAYSKWTAEMALGLSTGVPWIMCKQEDAPYPIIDTCNGFYCEGFKPNSVNKPKL
WTENWTGWFTEFGGAIPNRPVEDIAFSVARFIHNGGSFMNYYMYYGGTNFDRTAGVFIAT
SYDYDAPLDEYGLPREPKYSHLKELHKVIKMCEPALVSVDPTITSLGDNQEAHVFKSKTS
CAAFLSNYDTSHPARVIFRGFPYDLPPWSISILPDCKTEYHNTAKIRVPSVLMKMVPTST
RFPWKSYNEAIPSSNDVGTFVKDGLVEQISMTRDKTDYFWYLTDITISPNEKFVKTGDDP
LLTICSAGHALHVFVNGQLSGTSYGALSNSKLTFSQKIKLHVGINKLALLSTAVGLPNAG
VHYETWNTGVLGPATLTGVNSGTWDMSKWKWSYKIGTKGEAMSLHTTTGSSSVEWIEGSF
MAKKQPLTWYKSYFDTPVGNEPLALDMNTMGKGQIWVNGHNIGRHWPAYTARGNCGRCNY
AGIYNEKKCLSHCGEPSQRWYHVPRSWLKPFGNLLVVFEEWGGDPSGISLVKRTAE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtggcataagtgtcagcctttacatatctgtacacacagcttctagatcctca
ttcattccaatcacagatagagctgatattttcagcagaaacttctttaccagtttctat
aaagaaacaaagaaaacatagaaaaaaatgggtttgcattttagggataaagcatggatt
tttctggcaattttgtgtttttcatcattgatttactcaattgaagcagtggtcacttat
gatcataaagctttgatcatcaatggacaaagaagtatccttctctctggttctattcac
tatccaagaagcactcctgagatgtggcctgatcttatacacaaggccaaagaaggaggt
ttggatgttatacaaacttacgttttctggagtggacatgaaccttctcctggaaattat
tattttgaggataggtatgatctggttaaattcaccaagctggtgcatcaagctggtcta
tatcttgatctaagaattggtccatacgtttgtgctgagtggaattttgggggatttccg
gtttggctcaaatatgtccctggtatagttttcagaacagataatgaacctttcaagatt
gcaatgcaaaaattcacaaagaagattgtggaaatgatgaaagaagaaaagctgtttcaa
actcaaggaggacccatcattctctcacagatagagaatgagtatggaccaatgcaatgg
gagatgggagcagcaggaaaggcttactcaaaatggacagctgaaatggcattgggactg
tccacaggtgtcccatggattatgtgcaagcaagaggatgctccttaccccattatagac
acatgcaatgggttttactgtgagggtttcaaaccaaactcagtcaataagccgaagttg
tggactgagaactggactggttggttcacggaatttggaggtgcaataccaaacagacca
gtcgaagacattgcgttctccgtggctcgtttcatacataacggtggttcttttatgaat
tattatatgtattatggagggaccaactttgatagaacagctggtgttttcatcgccaca
agctatgactacgatgctcctcttgatgaatatggattaccgagagaacccaagtatagt
cacctaaaagagttacataaggtcatcaagatgtgtgaacctgcattggtctctgttgat
cccaccatcacatcactcggagataatcaagaagctcatgtgttcaagtccaagacttct
tgtgctgcatttctctcgaactacgacacgagtcatccggcaagagttatatttcgggga
tttccgtatgatttgcctccttggtctattagtattttaccagactgcaaaaccgagtat
cacaacaccgcaaagattcgtgtaccaagcgtacttatgaagatggtgcctactagcaca
cgatttccgtggaaatcgtacaacgaggcaatcccttcttcaaatgacgttggtacattt
gttaaagatggtcttgtggaacaaataagcatgaccagagataagacagattatttctgg
tatcttacagacattacaattagtcctaatgaaaagttcgtgaagactggtgatgatcct
ctccttacgatttgttcagctggacatgcccttcatgtattcgttaatggccagctttca
ggaacttcctatggagcactgagcaactcaaagctcacatttagtcaaaagatcaaactg
cacgtaggcatcaacaaacttgctctgctaagtactgcagttggtcttccgaacgctggt
gtgcattatgagacttggaatactggtgttctaggaccagccacattaacaggagttaac
tccggaacatgggacatgtctaaatggaagtggtcctacaagattggtactaaaggtgaa
gctatgagccttcataccacaaccgggagttcttctgtggaatggatagaaggatcattc
atggccaagaagcaacccttgacctggtataagtcatattttgatacaccggtaggcaac
gaaccattggctttggacatgaacacaatggggaaaggtcaaatttgggtaaacggacat
aacattggacgccactggcctgcctacacagcacgtgggaactgcggacgatgcaactat
gctggaatttacaacgagaagaaatgtctcagtcattgtggagagccttctcaaagatgg
taccatgtgcctcgttcatggctaaaaccatttgggaaccttctagtcgtatttgaggag
tggggtggtgacccaagtgggatctctcttgtaaaaagaacagcagaatga
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