Camelina sativa (false flax): 104712908
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Entry
104712908 CDS
T05044
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00052
Galactose metabolism
csat00511
Other glycan degradation
csat00531
Glycosaminoglycan degradation
csat00600
Sphingolipid metabolism
csat00604
Glycosphingolipid biosynthesis - ganglio series
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
104712908
09103 Lipid metabolism
00600 Sphingolipid metabolism
104712908
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
104712908
00604 Glycosphingolipid biosynthesis - ganglio series
104712908
00511 Other glycan degradation
104712908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104712908
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
104712908
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104712908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
104712908
NCBI-ProteinID:
XP_010428200
LinkDB
All DBs
Position
9:complement(29105796..29110888)
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AA seq
690 aa
AA seq
DB search
MAMTSRGSWPSSMGRHQLDFVLLLVLLAVGISVPVFALLPSLPRGEKLQIITSSRKFYIK
DDIFWKDGIAFQIIGGDLHYFRVLPEYWEDRLLRAKVLGLNTIQVYVPWNLHEPKPGMMV
FEGIGDLVSFLKLCQKLDFLVMLRAGPYICGEWDLGGFPAWLLAVKPRLQLRTSDPAYLK
LVERWWDVLLPKVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNLVSMARGHLGDDIIV
YTTDGGRRETLEKGTVPADDVYSAVDFTTGDDPWPIFELQKKFNAPGRSPPLSSEFYTGW
LTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSKEFDYKPDL
TSYDYDAPIKESGDIDNPKFQALQRVIKKYNAVTHSITPSKKLKAYGLIKMKMTTSLFDL
VSMTDPADVITSANPISMESAEQMFGFLLYESSYITKKSGNILRIPKVHDRAQVFVSCLS
QDVDVRVLSYIGTTERWNNQPISLPTTECNSNTSLFILVENMGRVNYGPYIFDEKGILSS
VYLDGQILHGWKMIPMPFHNLNQMPNLSFEMHHTKKRSEKFNLTNDVSQKEPALFAGEFF
IDSAEEIKDTYLSFNGWGKGVAFVNKFNIGRYWPSVGPQCNLYVPAPLLKPGKNTLVIFE
LESPHLELLLEAVDRQDFTCGSNDSKVDQL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacaagcaggggtagctggccatcatcaatgggaagacatcaactggatttc
gtgttgcttctcgttcttttagctgtcggtatctccgttcctgtctttgctcttcttcct
tcactgcctcggggagagaagttgcagataatcacatcatctcggaagttttatatcaaa
gatgacattttttggaaagatggaattgcttttcagattattggtggtgatttgcattac
tttcgtgttcttcctgagtactgggaagatcggcttctaagagccaaggttctaggcctt
aatactattcaagtatacgttccttggaatcttcatgagccaaagcctggaatgatggtt
tttgagggtattggtgatcttgtgtcctttctcaagctgtgtcagaaactagattttttg
gttatgctgcgtgctggaccttacatctgtggagaatgggatttgggaggatttcctgct
tggttacttgctgtgaaaccacgtctccaattaaggacgtcagatcctgcatatcttaag
ttggttgaaagatggtgggatgttctgttaccgaaggtatttcctctgctttacagcaac
gggggtcctgttataatggttcagattgaaaatgaatatggttcatatggaaatgacaaa
gcctatcttcgtaatctagttagtatggctaggggacacctgggggatgacattattgtg
tacacaacagatggagggagaagagaaactcttgagaaaggaactgtccctgctgatgat
gtctactcagctgttgatttcacaaccggtgatgatccctggccaatatttgaattgcaa
aagaagtttaatgctccaggaagatcacctccactttcctcggagttctatactggttgg
ctcacgcattggggtgagaagattgcaaaaactgatgctgaatttacagcagcttctctt
gaaaaaatactgtctcgaaatggttctgctgtgctttatatggtgcatggaggaacaaac
tttggtttctacaatggcgcaaatactggctctaaagaattcgactataaacctgatctg
acatcctacgactatgatgctcccattaaggagtctggtgacatagataatccaaaattc
caagctcttcagagagtgattaagaagtacaatgctgtaacacactccattaccccctcc
aagaaactgaaagcgtatggtcttatcaagatgaagatgacaacatcgctatttgattta
gttagtatgacagatcctgcagatgtgatcacctctgccaacccaatttcaatggaatct
gctgaacagatgtttgggtttcttttatatgaatcttcatacatcacaaaaaagagtggg
aatatactaagaatacccaaggttcatgacagagctcaagtgtttgtttcgtgcctttcc
caagatgttgatgtgagagtactgagttacattggtacaactgagagatggaacaaccaa
cctatttctcttccaactaccgagtgtaattccaacactagcttatttattctggttgaa
aacatgggacgagtaaattacgggccatatatctttgatgagaagggtattttgtcttcg
gtttatctagatggtcaaattctccatggatggaagatgataccaatgccttttcacaac
ctgaatcaaatgccaaatctcagtttcgagatgcatcataccaaaaagagaagtgagaag
ttcaatcttactaatgatgtcagtcaaaaggaaccagctctgtttgctggtgagttcttt
atcgacagtgcagaagaaatcaaagacacatatctatcattcaacggttggggtaaagga
gttgcttttgtcaataaattcaacatcggaagatattggccgtctgttggaccacagtgc
aacctctatgttcctgcgccgcttcttaaacctggcaaaaatactttggtgattttcgag
ttggaatctccacatctagagcttttgctggaggcagtggataggcaagacttcacttgc
ggttcaaatgattccaaagttgatcaattgtag
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