Camelina sativa (false flax): 104716259
Help
Entry
104716259 CDS
T05044
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat02010
ABC transporters
csat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104716259
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104716259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csat02000
]
104716259
Enzymes [BR:
csat01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
104716259
Transporters [BR:
csat02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
104716259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
DEAD
Mg_chelatase
nSTAND1
AAA_30
T2SSE
Motif
Other DBs
NCBI-GeneID:
104716259
NCBI-ProteinID:
XP_010431952
LinkDB
All DBs
Position
10:complement(742909..751877)
Genome browser
AA seq
1340 aa
AA seq
DB search
MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGAAVYLKSRVSSRKPDSSRHCNGQSD
DDEALEKLTGNDKNAKITTKNKKGGGLKSLQVLTAILLSQMGKMGARDLLALVATVVFRT
ALSNRLAKVQGFLFRAAFLRRAPLFLRLISENIMLCFMLSTMHSTSKYITGALSLRFRKI
LTKLIHSHYFENMVYYKISHVDGRITHPEQRIASDVPRFSSELSELIQDDLTAVTDGIVY
AWRLCSYASPKYIFWILAYVLGAGTAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSE
SIAFYGGETREESHIQQKFKNLVSHMSHVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF
FSGHLRPDDSTLGRAEMLSNIRYHTSVIISLFQALGTLSISSRRLNRLSGYADRIHELMA
VSRELSGDEKSTFQRNRSRNYLSEANYVEFSGVKVVTPTGNVLVEDLTLRVEQGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIYPL
TSDQETEPLTETGMVELLKNVDLEYLLDRYQPEKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHY
KRDDSALLTDAEIDSDSAKISDTDRQNDAMVVQRAFAAARKESATTNSKGQSYLTQLITK
SPVVDKSVMLPRFPQPQTFQRALPSRVAAMLNVLIPTIFDKQGAQLLAVACLVVSRTLIS
DRIASLNGTTVKYVLEQDKTAFVRLIGLSVLQSGASSIIAPSLRHLTQRLALGWRIRLTQ
HLLRNYLRNNAFYKVFHMSGNSIDADQRLTRDLEKLTSDLSGLLTGMVKPSVDILWFTWR
MKLLTGQRGVAILYTYMLLGLGFLRRVAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIA
FFGGGAREKAMVDTKFRALLDHSLMLLRKKWVYGILDDFVTKQLPNNVTWGLSLLYALEH
KGDRALVSTQGELAHALRYLASVVSQSFMAFGDILELNKKFLELSGGINRIFELDEFLDA
SQSGVPSENHTSRLESQDLLSFSEVDIITPAQKLMASKLSCEIVSGKSLLVTGPNGSGKT
SIFRVLRDIWPTVCGRLAKPSLDIKELGSGNGMFFVPQRPYTCLGTLRDQIIYPLSKEEA
EKRAAKLYTNGESSTEAGSVLDAHLKTILENVRLVYLLERDVGGWDATTNWEDILSLGEQ
QRLGMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLE
LRLIDGEGNWELRSIEQTTE
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactccaactattgcagttaactgagcgcggtcggggtcttgtagcgtcaaga
cggaaatctatactgcttgcggctgggattgttgctgctggtggagctgctgtttacctg
aaatcaagggtcagctctcgaaagcctgattcttcgcgtcattgcaatggtcagagtgat
gatgatgaggctttggaaaaactgactggaaatgataaaaatgcaaagataaccacgaaa
aacaagaaagggggaggattaaaatctcttcaggttctgactgctattcttctgtctcag
atgggaaaaatgggtgccagggatcttttggcactagttgccactgtggttttcagaact
gctttaagcaatagattagcgaaagtacaaggtttccttttccgtgctgctttcttaagg
cgtgcgccactgtttctacgtcttatctccgagaatattatgttgtgtttcatgctatcg
acgatgcactctacttcaaagtacattactggggccttgagtttgcgattcagaaaaata
ttgacgaagctaattcattcacattattttgagaatatggtgtattacaaaatatcacat
gtggatggtcggattacgcacccggagcaacggattgccagcgatgtaccaagattctcc
tcagagttgagcgaacttatacaggatgatttgacggcggttactgatggaattgtgtat
gcatggcgcctgtgttcatatgctagtccaaaatacatcttctggatattggcctatgta
ctgggtgccgggacggcaataaggaacttttctccttcttttgggaaattgatgtccaaa
gaacagcagttggaaggggagtaccggcaacttcattcacgattaaggactcattcggaa
agcatagcattctatggtggggaaaccagggaagaatcgcatatacaacaaaagttcaag
aatcttgttagccatatgagtcacgtgcttcatgatcactggtggtttggcatgatccaa
gatttcctgctgaagtatcttggtgctacagttgcagttattctgattatcgaaccattc
ttctctgggcatctaagacctgacgactcgaccctaggaagagctgagatgctaagcaat
ataagatatcacaccagtgtcattatatctctctttcaggcgctaggaacactttctata
agctccaggcggctcaaccgactcagtggttacgctgaccgaatccatgagttgatggct
gtctcgagagaactcagtggtgatgagaaatccacttttcaaagaaatagaagcagaaat
tacctaagtgaagctaactatgttgagttttccggtgtcaaggttgttactccaacggga
aatgttttggtggaggatctcacccttcgagttgagcaagggtctaatcttctgattaca
ggtcctaatggaagtggcaagagttcccttttccgagtattaggaggtctatggcccctg
gtgtctgggcacattgtgaagccaggagttggttctgatcttaacaaggagattttctac
gtgccgcaacgaccctatatggcagtaggaacacttcgtgaccagttaatatatcctctt
acttctgatcaagagactgaaccactcactgagactggaatggtggagctattgaaaaat
gttgatctagaatatttattggatcgctaccaaccggaaaaagaggttaactggggtgat
gagttatctcttggagagcaacagagattggggatggccagattattctaccacaaaccc
aaatttgcaattcttgatgaatgcacaagtgctgtgacaactgatatggaagaacgcttt
gccgctaaggttcgagctatgggaacttcttgcataacaatctcccatcgtccagccctt
gttgcatttcatgatgttgttttgtcactagacggcgaagggggatggagtgttcactac
aagagggatgactctgcccttctgacggatgctgaaattgattcagattcagcgaaaatt
tcagatacagatcggcaaaatgatgctatggttgttcaacgagcgtttgctgcagctaga
aaggaatctgctaccactaattcaaagggtcagtcgtacctgacacagttaattacaaag
tcacctgttgttgataaaagtgtaatgctgcctcgttttcctcaacctcaaacattccaa
agggctttaccatcaagagtagctgcaatgttaaacgtattgatacccactatatttgac
aaacaaggagcacaactgctcgctgttgcttgccttgtcgtctcaagaacactgatctct
gaccgaatagcctctttgaatgggaccactgtgaagtatgtcttggagcaagataagaca
gcctttgttcgtttgattggtttgagtgttctccaaagtggtgcatcttctatcattgct
ccttcattaaggcatctaacgcaaaggctagcgttagggtggaggattcgtttgactcaa
catctgctacggaattacttaagaaacaatgcgttttacaaggttttccacatgtcaggc
aatagtattgatgcggaccagagactcactcgtgacctggaaaagctaaccagtgacttg
tctggacttcttactggaatggtaaagccttcagttgacattctctggttcacctggagg
atgaagctattgactggtcagaggggagttgccatactttacacatatatgttacttggt
ttgggttttctgagacgtgttgctcccgatttcggtgatctagctggtgaagaacagcag
cttgaggggaagtttaggtttatgcacgaaaggctgaacactcatgctgaatctattgca
ttctttggaggtggagctcgagaaaaagctatggtggacacaaaattcagggccctgctg
gaccactctctaatgctcttgaggaagaaatgggtgtatggcatacttgatgattttgtt
acaaagcaacttcccaataatgtgacttggggattgagtttattgtatgccctagaacac
aagggagacagagctcttgtctccactcaaggtgaattggcacatgcattgcggtattta
gcttctgttgtctcccaaagctttatggcttttggcgatattcttgaactaaacaagaag
ttccttgagctctctggtggtattaacagaatttttgagcttgatgagtttttggatgct
tctcagtcaggcgttccctcagaaaatcacacaagtcgtttggaatctcaagatctactt
tccttttcggaggtggatatcattacccctgctcagaaattgatggctagcaagttgtca
tgcgaaatagtttcagggaaaagcctgcttgtcacaggtccaaatggtagtggaaagact
tctatatttagagtccttagagatatctggcccactgtatgcggaagacttgccaagcca
tcattggatatcaaagaacttgggtcagggaatggcatgttttttgtcccgcagcgacct
tatacatgtttagggacactgagagatcaaattatatatcctctatctaaagaagaagca
gagaaaagggcagcaaagttatacaccaatggagaaagctcaacagaagctggaagcgtt
ctggatgctcatttgaaaaccattttggagaatgttcggttagtttatcttttggaaaga
gatgtaggtggttgggatgctactaccaattgggaagacatattatctcttggagagcaa
cagagactaggcatggcacgtttattctttcacagaccgaagtttggagtccttgatgaa
tgcaccaacgcgacaagtgttgatgttgaggaacagctctatagggttgcaagagatatg
ggagtcactttcataacctcgtcacaacggcccgctctaatcccgttccactccttggaa
ttgaggttaattgatggagaaggaaactgggagctccgttcgatcgaacaaacaacagag
taa
DBGET
integrated database retrieval system
