Camelina sativa (false flax): 104722810
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Entry
104722810 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104722810
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104722810
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
ADNP_N
DUF4135
Motif
Other DBs
NCBI-GeneID:
104722810
NCBI-ProteinID:
XP_010439352
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Position
2:complement(12297208..12299020)
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AA seq
395 aa
AA seq
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MGRVNFGVSAFFIFCLLGLSANAKVFNIGSKPGCDITKALLKAFNEACQFPTKSTVLIPK
GEYKLGEIEMTGPCKAPIRIALQGTVKADGNAVHSEKWIAFRNIDGFKLNGGGVFDGEGN
AAWRVNNCHHTWKCKKLPISIRFDFVTNAKIRGITSLDAKHFHINVIGAKNMTFEEVKIV
APAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSL
GRYGHEQDVMGIKIVNCTLQETDNGLRIKTWPTAACSTSASDIHFENILLKNVSNPILID
QEYCPWNQCDKKKASTIKLSKISFKNIRGTSGNKDAVKLLCSKGHPCQNVELGNINIKYT
GADGPATFQCSNVSPKLMGTQVPKACSSPVTKPLK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgtaaattttggagtatcggcgttctttattttttgtttgttaggtttatca
gctaatgcaaaggtattcaacattggctctaaaccaggctgtgacatcactaaagcattg
ttgaaagcattcaacgaggcatgccaattcccgacgaagagcaccgttctgatcccaaaa
ggtgaatacaagcttggggaaatcgagatgacgggtccatgcaaagctccaataaggatt
gctcttcaaggtaccgtgaaagctgacggaaacgctgttcatagtgagaaatggatcgcc
ttccgcaacattgatggctttaagttgaacggaggtggtgtcttcgacggtgaaggtaac
gcagcttggagggtcaataactgccaccatacttggaagtgcaagaaactacccatcagc
atccgttttgattttgttacgaacgcgaaaattagaggcataacctccttagacgcaaag
cacttccacattaacgtgattggtgcaaagaacatgacattcgaagaagtcaagatcgtg
gcccctgcagagagccctaacaccgatggtatccacgtgggaagaagtgatggaatcaag
atcatcaattcatttatctccacgggagatgactgtgtctctgtcggagacgggatgaag
aaccttcttgtggaaagagttacctgcggtcccggacatggaatcagtattggaagtctc
ggaaggtacggacacgagcaagacgtcatgggcatcaagatcgtcaactgcaccctccaa
gagactgacaatgggctaaggatcaagacatggcctactgcagcttgcagcacaagcgcc
tccgatatccatttcgagaacatcctcctcaagaacgtcagcaaccccatcctcattgac
caagagtactgcccatggaaccagtgcgacaagaagaaagcttcaacgatcaagctgtcc
aaaataagcttcaagaacattagaggaacatcagggaacaaagacgcagtgaagcttttg
tgcagcaagggacatccatgtcagaacgtggagctcggtaacattaacatcaagtacacc
ggagccgacggtccagccacattccaatgctcaaacgtatccccgaagctgatgggaact
caggttccgaaagcgtgtagcagcccggtgacaaagccactaaagtag
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