Camelina sativa (false flax): 104751225
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Entry
104751225 CDS
T05044
Name
(RefSeq) cyclin-dependent kinase D-1-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104751225
09124 Replication and repair
03420 Nucleotide excision repair
104751225
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104751225
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104751225
03019 Messenger RNA biogenesis [BR:
csat03019
]
104751225
03400 DNA repair and recombination proteins [BR:
csat03400
]
104751225
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104751225
2.7.11.23 [RNA-polymerase]-subunit kinase
104751225
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: CMGC group
CDK family
104751225
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104751225
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104751225
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104751225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
DUF6193
Motif
Other DBs
NCBI-GeneID:
104751225
NCBI-ProteinID:
XP_010471436
LinkDB
All DBs
Position
16:19178584..19181068
Genome browser
AA seq
398 aa
AA seq
DB search
MDQPKKVADRYLKREVLGQGTYGVVFKAIDTKNGETVAIKKIRLGKQKEGVNITALREIK
VLKELKHPHVIELIDAFPHKENLHIVFEYMETDLEAVIRDPNLFLSPADVKSYLQMMLKG
LEYCHDKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFSSPGHKFTHQVFTRWYRAPELL
FGAKQYDGAVDVWAAGCIFAELLLRRPFLQGKSDIDQLSKIFAAFGTPKADQWPDMISLP
DYVEYQFVLAPSLRSLFPMVSEDALDLLSKMFTYDPKSRISIQQALQHRYFTSAPSPTDP
LELPRSVRQQGAKSTDSKHKAIKVLSPAHKFRRVIPGRGKSANKSKDQSVDVVRQASHDG
QAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEFM
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaccagccgaagaaagttgctgataggtatctgaaacgtgaggttcttggtcaaggt
acttacggagtcgtcttcaaggctattgacactaagaacggagagactgtagcgattaag
aaaataagacttgggaaacaaaaagaaggtgtgaatataacagctctcagagaaatcaaa
gtacttaaagagcttaagcatccacatgtgattgagttgattgatgcgtttcctcacaag
gagaacttgcacattgtgtttgagtacatggagactgatctcgaagcagttatccgcgat
cctaacctgtttctttcccccgctgatgtcaaatcttacctccagatgatgttaaaaggt
cttgagtattgccatgacaagtgggttttgcacagagatatgaagccaaacaacttgttg
ataggacctaatggacaactgaagcttgcagattttgggttagctcgtatatttagtagc
cctggtcataagtttacccaccaggtctttacgagatggtatagagcacctgaacttttg
tttggtgcaaaacagtatgatggtgcagttgatgtttgggctgctggctgtatttttgct
gaacttctattacgcagaccatttcttcagggaaagagtgatattgatcaattaagcaaa
atctttgctgcctttgggaccccaaaagcagatcagtggccagatatgatcagccttcct
gattatgtagagtatcaatttgtcctcgcaccttctctacgttctctattcccaatggtt
agtgaggatgctctagatttgttgtctaagatgttcacctatgaccccaagtctagaata
tcgattcagcaagctctgcagcacaggtacttcacatctgcaccttctcctactgaccct
ttagagctaccaagatcagtacgccagcagggtgctaagtcaactgacagtaaacacaaa
gccattaaagtgttgtcaccagcacataagtttagacgagtgatacctggccgaggaaag
tctgctaataaatccaaggaccagagtgttgatgtcgtgagacaagctagccatgatgga
caagcaccaatgtctttagatttcaccatcttagccgagcggccacctaaccgaccaacc
atcaccagtgcggatagatctcatctgaagaggaaactcgatctcgagttcatgtag
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