Camelina sativa (false flax): 104759314
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Entry
104759314 CDS
T05044
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104759314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104759314
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104759314
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104759314
FA (Fanconi anemia) pathway
Downstream FA components
104759314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Motif
Other DBs
NCBI-GeneID:
104759314
NCBI-ProteinID:
XP_019094422
LinkDB
All DBs
Position
17:complement(9628316..9634442)
Genome browser
AA seq
1213 aa
AA seq
DB search
MVSTTSKSDSKDEVKQTLNPENPKKLYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQR
DGHSHALLESPTGTGKSLSLLCSVLAWQKSYLSRFSNGNFSHLKTQPSDTTLPSNVEPPE
PPNIPTIYYASRTHAQISQVIREYKKTGYRVPMAVLGSRKRCCTNRHVQGKDNVDEKCRL
LLKDKKNPKCPEFEGAARILAYPSLRQNGHNGVHDIEDLVKIGKTVIGCPYFASRKMLEV
AKLVFCPYSYIIDPVIRGGINLKGAIKLLKPCYNMEDIAREAGSINLEEDIIIKLRNELE
KLSDDEPEFYEPLYEVVEGLISWIGSKKDSLAKRDSEHYFSNWTGDRALKELKEFNITPE
YLPQLQACLDQAITKSEAAEMDPDKPYLSGISVTTLEELFATLTYFFSKNGSHVLDYEMG
LLRSARRGTRDTGWTHTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGLPF
ATCLEAPHVIDPNLQVWAGAISSGPGNYPLNASYKTADAYEFQDTLGKSLEEICNIVPGG
SLVFFPSYKLMEKLCTRWRETGQWSRLCLKRDLFIEPRGGATDDFETVLKEYYDSISGKN
RLIGRNRRVKKAGSVVTEAQDDYKKGSAFLAVCRGKVSEGLDFSDEKARAVIIVGIPFPN
LHDILVELKRKYNDTYKSSKNLLGGGEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDER
YRQPRNRASISKWLRQSIKLYDNFEASMEGLRYFFSSVKEQVNSKMLESHEQNLSSENQS
KEFIKKENQIQNNSSHVEPKDIASRRVVNVEDYTSSNPRYSFTNEVLIHNDVKPKIALRS
RSMRLPESYPGYVPAAHTFIQVKKETESFKGVIDLDCEVQTEPGYCEVSSVTNCDEDPET
SSVSGIATASPGSSSKNESSSLATGLRSMKSPDQFLKRHISTENFRKSPLGTESSVLVTP
ERYSIGGDTRNSILEAESPLNMSVNSNALKRRKFSSSPVIIDLEEEEYSNAPSTEPADHT
NFTRKIEFGFGSTESRSQNENTYAFQEVNQRVMRISCSLCRSSLGHPENDSHPKCLLTSS
SKAYLLSLLKEASGIAAQEEMPTSVSVIMTDCSLVNQRLCTNSESSKGQGIWCQKDGCVY
NTIFCPFCSVPNTCLGVQVMATNSSNVQLMSKILFFADHLEVKNDDASKETALKHKFGTN
GDAKDVEIEVKLF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggtttccacaaccagcaaatcggattccaaggacgaagtgaaacaaaccctaaacccc
gaaaaccctaaaaagctttaccagatcggaggccttcaagttgagttcccttatcaaccg
tatggaacccagcttgcgttcatgagccgggtcatatctacgctcgatcgtgcccagaga
gacggtcactcccacgcattgctcgagtctccaactggtactggcaaatctctgtctttg
ctctgttctgttctcgcttggcaaaagagctatctatcgcggttttccaatgggaacttt
tctcatttgaaaacgcagccttcagatactactttacctagcaatgtggagccacctgaa
ccaccaaatattcccaccatatactatgcttcacgaactcatgctcagatctctcaagtc
attcgtgagtataaaaaaactggttacagagtgcccatggctgtattgggttctaggaaa
cgttgctgcacgaatcgtcatgtacaagggaaagacaacgtagacgaaaaatgtcggttg
ctcctaaaagataagaaaaacccaaaatgtcctgagttcgaaggtgccgctcgcatctta
gcttacccatcacttaggcaaaacgggcacaatggggttcatgacattgaagaccttgta
aaaattgggaaaactgttataggctgtccatattttgcttccaggaaaatgttggaggtt
gcaaaattggttttttgcccttattcatatataattgatcctgtaattcgaggaggaata
aatctaaaaggagccattaagcttctgaaaccttgttacaatatggaagacattgctcgt
gaagcaggaagcattaacttggaagaagatattattatcaaattgcggaatgaactagaa
aagttgagtgacgatgagccagagttctatgaacccttgtatgaagtagtagagggattg
ataagttggattggaagtaaaaaagattcattagcaaaacgtgattctgagcactatttc
tctaactggactggagacagagctttgaaagagctcaaggaattcaatatcactccagag
tacttgccacaattacaggcgtgtcttgatcaagcgatcacaaaatcagaggcagcagag
atggaccctgataagccttatttgagtgggatatctgtcacgacactagaagagttgttt
gctacacttacatacttcttttccaaaaacggaagtcacgtcctagattacgaaatgggt
ttactacggtctgctaggagaggtacaagagatactggttggacgcatacgttcagtttg
tggtgcatgaatccctctgttgtattcaaagacttagctgatctttctttatccatcatt
ttaacatctgggactttgtcaccgatgaattctttctcatctgaacttgggttgccgttt
gccacttgtttagaggctccacatgtgattgatcctaatctgcaggtgtgggcgggtgca
atctccagtggtcctggtaattatcctctaaatgcaagttataaaacagctgatgcatat
gaattccaggatactctagggaaatccttggaagaaatttgcaacattgtaccaggtgga
tctctggtattctttccaagctataagttgatggaaaaactctgcacgcgttggcgtgaa
actggacaatggtctcggctctgcttgaaaagggatcttttcatcgaaccaagaggagga
gccacggacgacttcgaaactgttctgaaggaatattatgattcgataagcggaaagaac
agattgattggaagaaatagaagagttaagaaagcaggttctgttgtaactgaggctcaa
gatgattacaagaaaggatctgcatttcttgcagtatgtagaggaaaggtttcagaaggg
cttgatttttctgatgaaaaggccagggcagtgataattgttggcattccatttccaaac
ttgcacgatattctagtcgaactaaagcgaaaatataatgatacatacaaatcatctaaa
aaccttcttggaggcggtgaatggtattgccaacaggcgtatcgtgctttaaatcaagca
gcagggagatgtatccggcataggtttgattatggtgccatcatattcttggatgagcga
tacagacaaccaaggaacagagcgtctatttcaaagtggctaaggcagtctatcaagctg
tatgataattttgaagcttctatggaaggattaagatattttttcagcagtgtcaaggag
caagttaacagtaagatgttagagtcccatgagcagaacttatcttctgaaaaccaaagc
aaagaattcataaagaaagagaatcagattcagaacaattctagtcatgtggaaccaaag
gatattgcaagtaggagggtggtgaacgtggaggactatacaagttcgaatccaagatac
tcttttacgaacgaagttttaattcacaatgatgtgaaaccaaaaatagctttacgttcg
agatctatgcggcttcctgaatcatatccaggttacgtacctgctgctcacacattcatt
caagttaaaaaggaaactgaatcctttaaaggagtcattgatcttgactgcgaggtccag
actgagcctgggtactgtgaggtttcgtcggtgaccaactgtgatgaagatccagaaaca
tcttctgtctctggtattgcaaccgcgagtccaggttctagctcgaagaatgaaagctct
agcctagcaacaggtctgagatctatgaagtctcctgatcaattcttaaaaaggcatata
tctactgaaaatttcagaaaatctcctcttggtactgaatcgtctgttctagtaacccca
gagagatattccattggtggtgatacacgtaattcgattctagaagcagagtcgcctttg
aacatgagtgttaattccaatgccttgaagagaagaaagtttagtagctcaccagtcatc
attgaccttgaagaagaagaatacagtaatgctcctagtactgaacctgcggatcataca
aattttacaaggaaaattgaatttgggtttggtagtaccgaatcaagatcccaaaacgaa
aatacatatgcttttcaggaagtgaatcagagagtgatgaggatatcttgttcactttgt
agaagttcattaggtcaccctgagaacgactcgcatcccaaatgcttgttgacttcgtcg
tccaaggcgtatttgctgtctcttctgaaagaagcatcaggtattgctgctcaagaagaa
atgccaacgagtgtttcagttatcatgacagattgctcattggttaatcagagactgtgc
acaaattctgaaagctcaaaaggtcagggaatttggtgccagaaagatggatgtgtttac
aatactatattttgccctttctgtagtgtcccaaacacctgccttggagtgcaagtcatg
gctacaaattcatcaaacgtccagcttatgagcaaaattttgttctttgctgatcatcta
gaagtcaagaatgatgatgcaagcaaggaaacagcgttaaagcacaagtttggaacaaat
ggagatgcgaaagatgttgaaatagaagtgaagttgttttaa
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