Camelina sativa (false flax): 104766718
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Entry
104766718 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104766718
09124 Replication and repair
03420 Nucleotide excision repair
104766718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104766718
03400 DNA repair and recombination proteins [BR:
csat03400
]
104766718
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104766718
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104766718
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
104766718
NCBI-ProteinID:
XP_010518168
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All DBs
Position
1:17797556..17799604
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AA seq
319 aa
AA seq
DB search
MDGATYQRFPKVKIRELKDDYAKFELRETDVSVANALRRVMISEVPTVAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV
TSRDLYSADPTVTPVDFTVDSAVSDSSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTEEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTY
DEEVIKKAEAMGKPGLIEIHPKDDSFVFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgccacttaccaaagattcccaaaggtcaagatccgtgagcttaaagatgac
tacgccaagttcgagctccgtgaaaccgacgtttcagtggccaacgctctccgtcgcgtt
atgatctccgaagtacccaccgttgcaatcgatctcgtcgaaatcgaggttaactcctcc
gttctcaacgacgagttcatcgctcatcgattaggtctcattcctctcaccagcgagcgt
gctatgagcatgcggttctctcgtgattgtgatgcttgtgatggagatggacagtgcgag
ttttgctctgttgagtttaggcttagtgctaagtgtgttactgaccaaaccctggatgtt
actagcagggatctctacagtgctgatcctactgttactcctgttgatttcactgtcgat
tcggctgtctctgattcaagcgagcaaaaggggattatcattgtgaaactgcgcagggga
caagagttgaggcttagggcgatagcgaggaaaggaatcgggaaagatcatgcgaaatgg
tctcctgcagctactgttacgtttatgtatgagcctgacattattatcaatgaagatatg
atggacactttgacagaagaggaaaagatcgacttgattgagagcagcccaaccaaagtt
tttggcattgacccggtcaccagacaggttgtggtggttgatcctgaagcttacacttac
gatgaagaagtgatcaagaaagctgaagccatggggaaaccgggactcattgagatccat
cctaaagatgatagttttgtattcactgttgaatccacaggtgcagtgaaggcatcacag
ctggtactaaatgccatagatatcctaaagcagaagcttgatgcagtgcgtctctcagat
gacactgttgaagcagatgatcagtttggtgaacttggcgcccatatgcgtggaggatga
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