Camelina sativa (false flax): 104772293
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Entry
104772293 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104772293
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104772293
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104772293
03036 Chromosome and associated proteins [BR:
csat03036
]
104772293
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104772293
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104772293
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104772293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
SCD
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
104772293
NCBI-ProteinID:
XP_010495228
LinkDB
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Position
3:complement(6096719..6100711)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMADEPLYPIAVLIDELKNDDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVREKAVESLCRIGSQMREN
DLVEHFFPLAKRLSGGEWFTARVSACGIFHIAYPSAPDQLKAELRSIYSQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSRLLPAVITASKDRVPNIKFNVAKMMQS
LIPIVDQSVVENMIRPCLVELSEDPDVDVRFFANQALQSIDNLMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggctgatgagcctctgtacccgattgctgtgctaatagacgagctgaaaaac
gatgatattcagcttagattgaactctattagacggctttctatcattgctcgtgccctt
ggagaggagaggacaagaaaggagttgatcccatttcttagtgaaaacaatgacgatgat
gatgaggtgcttctggccatggcggaagagttgggtgtttttattccttacgtaggaggc
gttgagcatgcacatgttttgcttccaccgctggagactctctcgacggttgaggaaact
tgtgtgagggaaaaagctgtagagtcactttgcagaattggttctcagatgagggagaat
gacttggttgagcatttcttccctctggctaagcgactttcaggtggtgagtggttcaca
gccagggtatcagcatgcgggatttttcatattgcatacccaagtgctccagatcagcta
aaggcggagctaagatcaatatacagtcagctgtgtcaagatgacatgccaatggtgcgc
agagctgcagcaacgaatttggggaagtttgctgctacaattgaatcagctcatttgaag
actgacattatgtccatgtttgaggatcttacgcaagatgatcaagattcagttagatta
ttggctgttgagggttgtgctgctcttgggaaattgttggagccccaggactgtgtcaca
cacattcttcctgtaattgtcaatttctcgcaggataagtcatggcgtgtgcgttatatg
gttgcaaatcagctctatgaactttgtgaagctgtaggaccagagccaactaggacggat
ttggtgcctgcatatgttcgtctacttcgtgataatgaggctgaagttcggatagcagct
gctggaaaggttaccaagttttgtcgcattttaaaccctgaactcgcgatccagcacatc
cttccctgtgtaaaggaattatcgtcagactcttctcagcacgtcagatctgcattggcc
tcagttataatggggatggctccagtcttgggtaaggatgcaacaattgagcatcttctc
ccaatatttctttctctattgaaggacgaatttcctgatgtacgcttaaacattatcagc
aaacttgaccaagtgaaccaggtcattgggattgatctactatcacaatctttattgcca
gccatcgtagaacttgctgaagacaggcattggagggtacgtctggctataattgagtat
attccattgttggccagccaattaggtgtaggcttctttgacgataagcttggtgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgtgaagctgctgcgaacaatctt
aagcgtcttgctgaagagtttggtcctgaatgggcaatgcagcatatagttcctcaggtt
ctagagatgatcaacaatccgcactatctataccggatgacgattcttcgtgcagtatcg
cttctcgcgccagtaatgggatccgagatcacatgttccagactcttgcctgcggtgata
accgcatctaaagacagagttccaaacatcaagtttaacgtcgccaaaatgatgcaatcc
ctcattccgatagttgaccaatcggttgtggagaacatgatacggccatgtttggtggag
ctaagtgaagacccagacgttgatgtacggttcttcgcaaatcaagctctccagtctatt
gacaatttgatgatgtctagctaa
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