Camelina sativa (false flax): 104776693
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Entry
104776693 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104776693
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104776693
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104776693
03036 Chromosome and associated proteins [BR:
csat03036
]
104776693
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104776693
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104776693
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104776693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
HEAT_EZ
Vac14_Fab1_bd
PDS5
SCD
Adaptin_N
CLASP_N
TAF6_C
Cnd1
CEP104-like_TOG
Cobl
Motif
Other DBs
NCBI-GeneID:
104776693
NCBI-ProteinID:
XP_010499103
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Position
3:complement(12027630..12031512)
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AA seq
588 aa
AA seq
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MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEYAHVLLPPLESLCTVEETCVREKAVDSLCKIGSQMRET
DLVDSFVPLVKRLAAGEWFAARVSACGIFHVAYQGCTDVLKTELRSTYSLLCQDDMPMVR
RAAASNLGKFATTVESTYLIAEIMTMFDDLTKDDQDSVRLLAVEGCAALGKLLEPQDCVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHLVPQV
LDMVNNPHYLHRMMVLRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALNSIDGTTAAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtagatgaaccgttgtatcccattgctgtgctcatagatgagcttaagaat
gatgatattcagcttcgtttgaactccatccgtcgcctgtctacgatagctcgtgccctt
ggagaggagcgcacaagaaaggaattaatcccttttctgagtgagaacagtgacgatgac
gacgaggtgctccttgctatggctgaggaactgggagtttttattccgtttgttggagga
attgagtacgctcatgttcttctccctcctttggaatctctctgtactgttgaagagacc
tgtgtgagagaaaaagctgtggattcgctttgtaagattggatctcaaatgagggaaact
gaccttgttgattcctttgttcctcttgtgaagagactggcagctggtgaatggtttgca
gcaagagtttccgcatgtggtatatttcatgttgcataccaaggttgcactgatgttctg
aagacagagttacggtctacttatagcctgttgtgtcaagatgatatgccaatggtgcga
agagctgctgcatctaacctggggaaatttgccactactgtggagtcgacctatttgatt
gctgagatcatgactatgttcgatgatctcactaaagatgaccaagattctgttagactg
ttggctgtcgaaggctgtgcagctctggggaagttgctcgaaccgcaggattgtgttgca
cgcattttacctgttattgtcaatttctctcaggataaatcttggagggtgcgttacatg
gttgctaatcagctatatgaactttgtgaggcagtgggtcctgattgcaccaagactgat
ttggttccagcatacgtgagattgttacgggacaatgaggcagaagtgcgaatagcagca
gcaggaaaagtgaccaagttctgtcgtcttttgaatcccgagcttgctattcaacacatc
cttccttgtgtgaaggaattatcatcggactcttctcaacatgttcggtctgctttagct
tcagtaataatggggatggctcctatccttgggaaggattcaaccattgagcatctgtta
ccaatttttctttctctattgaaagatgaatttcctgatgttcgcctcaacatcataagc
aagcttgatcaagtcaaccaggttattggaattgatttactatcacaatcattgttgccg
gcgattgtagaacttgctgaggatcgacactggagagtccggcttgcgataatagagtat
gttcctctgttggccagtcagttaggtatagggttttttgatgacaagcttggagccctt
tgcatgcaatggctgcaagacaaggtttactccatccgtgaagctgcagcaaacaaccta
aagcgtctcgcagaggagtttggtcctgaatgggcaatgcaacatttagttccccaggta
ctggacatggtcaacaatccgcactacttacataggatgatggttctacgtgcaatctct
cttatggctcctgtaatgggatcagaaatcacatgctctaagtttcttcctgtggtggtt
gaagcatcaaaagacagagttccaaacattaagttcaacgttgccaaacttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaaaactatccgtcagtgcttggtggac
ctgagcgaagaccctgatgttgatgttcgctattttgcaaaccaagcgcttaattccatc
gatggtaccacagcggcgcaatcttga
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