Camelina sativa (false flax): 104777021
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Entry
104777021 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104777021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104777021
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104777021
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104777021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
104777021
NCBI-ProteinID:
XP_010499511
LinkDB
All DBs
Position
3:complement(14007673..14014918)
Genome browser
AA seq
1190 aa
AA seq
DB search
MVVNAKDSTVPNVEDFRELHNLVTHHIESFDYMTDKGLDVMFNRIKPVTVYDSDSDNNLS
IWLENPVVFAPQKESFSSTSRKEPLFPFEARQAKISYTGTFMADVCFKYNDGVVVRDKFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM
IRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSATVGFWIGGREYLFPVGLVL
KALTKTNDEEIYKCLNCCYNENYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH
LGEHFQPVLDGLEKEKYPTVAEAVLRDFIFVHLDNDDDKFNLLIFITQKLYSLVDQTSLP
DNPDSLQNQEILVPGHLITIYLKEKLEDWLRKCKSLLKDELHNKSSKSKFSFESLADVKK
VINKNPPRSVGTLIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKI
RKSVVEVLVGVGMVPSLPKLVRAAPPEVIHVLLDGQVVGTLSSNVVTDVVSYLRRLKVEA
PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSENIELIGPFEQVFMEI
SCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYST
QALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILN
KSSVERGMCHGQIYQTETIDLSDQNSRYDSGHKSFRRSHADKSVHSSIDADGLPYVGQKI
YPDEPYYSVYDEVTSRIRTTRRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGD
KFSSRHGQKGVCSQLWPDVDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL
HGKFVDATPFRNAMKKPNGDKESKSSLLVDDLGSMLTEKGFNYYGTETLYSGLLGVELEC
DIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA
SYLLHDRLHTSSDHHIADVCSLCGSLLTSSIVNVQQKKLIQVAGKLPPGRTPKKVTCHSC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSEREGATDEDLIPEEEK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaacgcgaaagactcgacggttcctaatgtcgaagacttcagggagcttcac
aatctcgtcacacatcatatagagtcgttcgattacatgacagataaaggtctcgatgtt
atgttcaatcgaatcaaaccggttactgtctacgattcagactccgacaacaacttgagc
atttggttagagaatcctgtagtattcgctcctcagaaggagagtttcagttcaacatca
aggaaagagcctttgtttccctttgaggctaggcaggcgaaaatttcgtatacaggaacg
tttatggctgatgtttgctttaagtataatgatggagttgttgtcagagacaaatttgat
tttgggcaatttcccattatgcttatgtcaaagctttgcagcttaaggggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttgttttgaat
gggatcgagagagtgttccgatgtgttattgcacctaagcgaaaccatccaacaagtatg
atccgaaactcattccgtgatcgtcgggaaggatacagtgacaaggcagttgccattagg
tgtgttagggacgaccagtcatctgtcactgttaaactgtattatcttcgcaatggaagt
gccacagttggattttggatagggggaagggaatatttgtttcctgtcggtcttgttctc
aaggctctcactaaaaccaacgatgaggaaatatataaatgcctgaactgttgctacaat
gagaattatggaagaggcgatggagctattggaacccaactcgttcgtgagagagccaaa
attattcttgatgaagtgcgagacttgggtctttttacccgggaacagtgccggaagcac
ttaggagagcattttcaacctgttcttgatgggttagaaaaagaaaaatatcctactgtt
gctgaagctgtgctcagggattttatatttgttcatcttgacaatgatgacgacaagttc
aatttgctcatcttcataactcagaagctctattctttggtggatcagacttctttacct
gacaatccggattctttgcaaaatcaggaaattttggtcccaggtcaccttataactatt
tacctcaaggaaaaacttgaagattggctgcggaagtgcaaaagtcttcttaaagatgag
ttgcataacaagagctcaaaatcaaaattttcatttgaaagccttgctgatgtcaagaag
gttattaacaaaaatccccccaggagtgttggtacgttaattgaaacattgttgaagaca
ggaagaatgaatacacagtcaggtttggatttacagcagagagcaggttacactgttcag
gctgagagattgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgct
tcttttgctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttgggggttt
ctttgccctgttcacactcctgatggggaaccttgtggattactgaatcatatgactcgt
actagccgaatcacttctcagttcgattcgaaaggaaacatcagagattttctgaaaata
agaaagtcagttgttgaagttcttgttggggtgggtatggtaccttcattgccaaagcta
gtacgagcggcaccaccagaagtcattcatgttcttttagatggtcaagttgtaggcacg
ctatcttctaacgtagtcacggacgttgtctcctatttgcggagactgaaagttgaggct
ccttcagtgattcctgaagacctcgaagtgggatatgtacctacaagcatgggtggatct
tatcctggattgtatttggcatcatgtcctgcaagattcattaggcctgttaaaaatata
tctataccttctgaaaatattgaacttattggaccattcgaacaggttttcatggaaata
agctgtcctgatggaggaaatgggggaaggaataactcttccccagcaactcacgaggaa
attcatccaactgggatgataagtgtggttgctaatcttacaccttggtcagatcataac
caaagtccgcggaacatgtatcagtgtcagatggccaaacaaaccatggcatactctact
caagctctccaatttcgtgccgaccagaagatttaccatttgcagactcctcaatcccct
gttgtgcgcacaaaaacatacaccacttacagtattgatgagaatcctacagggactaat
gctattgttgctgtcctcgctcatacaggatttgacatggaagatgctatgattttgaac
aaatcatctgtggagcggggaatgtgccatgggcaaatataccagacagaaactattgat
ctgtcagatcagaatagccgatatgatagtggtcataaaagttttaggaggagtcatgct
gacaaatcagttcattctagtatcgatgctgatggattaccatatgttgggcagaaaata
tatccagatgagccgtattatagtgtctatgatgaggtaactagcagaataaggaccacg
aggcgaaaaggtaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaag
aaacatcctcaaaaggcgaatattcgtttccggcatgcaagaaaccccattattggagac
aagtttagtagtagacatgggcaaaagggtgtttgttcccagttgtggcctgatgttgat
atgccgtttaatggagttactggcatgcgtccagatctcatcattaaccctcatgctttc
ccatcaagaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtttg
catggaaagtttgtagatgcaacgccgtttcgtaatgcaatgaaaaaaccaaatggagat
aaggagagcaagtccagtttgctcgttgatgatctcggttccatgttaacggagaaaggg
ttcaactactatgggactgagacattatatagtggacttttaggagtagaactggagtgt
gatatatttatgggccctgtttactaccaaagattgcgtcacatggtctcagacaaattc
caggttaggtccactggacaagtggatcaactaactcatcagccaatcaagggaaggaaa
cgaggtggagggattcggtttggtgaaatggaaagagactcactacttgctcatggagct
tcctatctattacacgacaggcttcacacttcttcagatcaccacattgcagatgtatgt
tcactgtgtggaagcttgctcacttcgtctattgtgaacgttcaacagaagaagctaatt
caagttgctggaaagttacctcctggtagaactccaaagaaggtaacttgccattcctgt
aagacaagtaaaggcatggaaacagttgcaatgccatatgtgttcagatacttggctgca
gagttggcttcaatgaatattaagatgactcttcagttgagcgagagagaaggagcaacc
gatgaagatttaataccagaggaagaaaaataa
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integrated database retrieval system
