Camelina sativa (false flax): 104781856
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Entry
104781856 CDS
T05044
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00900
Terpenoid backbone biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104781856
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104781856
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104781856
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104781856
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Gene cluster
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Motif
Pfam:
polyprenyl_synt
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
104781856
NCBI-ProteinID:
XP_010509730
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Position
5:complement(8005473..8008833)
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AA seq
423 aa
AA seq
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MIFTRAVSRVSSKFLRNRSFYGCSQSIASHRLSILPDQGHSCSDVSTHKGYVCRTTYSLK
SPVFGGFTHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVVAEVPKLASAAEYFFK
RGVQGKQFRSTVLLLMATALNVRVPEVLVGESADIVTSELRVRQRGIAEITEMIHVASLL
HDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHL
VTGETMEITSTTEQRYSMEYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGKN
LGLAFQLVDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREVVDRVEKDPT
NVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVIT
RNK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatattcacgagggctgtttcacgggtttcttcaaagtttctgaggaaccgtagcttc
tatggttgctctcaatctattgcttctcatcgtctctcaatcctccccgatcagggtcac
tcttgttctgacgtctctacacacaagggttacgtttgcagaacaacatattcattgaaa
tctccggtttttggtggatttactcatcaactatatcaccagagcagctcattagtcgag
gaggagcttgacccgttttcgcttgttgccgatgagctgtcacttcttagtaataagttg
agagagatggtagttgccgaggttccgaagctcgcctctgcagctgagtacttcttcaaa
aggggtgtgcaaggaaaacagtttcgttcaactgttttattactgatggcgacagcgctg
aacgtacgtgtaccagaagtattggttggtgaatcagcagatatagtcacatcagagtta
cgcgtaaggcaacgtggtattgctgaaatcactgaaatgatacatgttgcaagcctcctg
catgatgatgtcttggatgatgccgatacaaggcgtggtgttggttccttaaatgttgta
atgggtaacaagatgtcggtactagcaggagacttcttgctctcccgggcttgtggggct
ctcgccgctctgaaaaacactgaggttgtagcgttacttgcaactgcagtagaacatctt
gttaccggtgaaaccatggaaataactagtacaaccgagcagcgttatagtatggagtac
tacatgcagaagacatattataagacagcatcgctaatctctaacagctgcaaagcggtt
gctgttctcactggacaaacagcagaagttgccgtgttagctttcgagtatgggaagaat
ctgggtttagcattccaattggtagacgacattcttgatttcacggggacgtctgcctct
ctcggaaagggatctttatcagatatccgccatggagtcataacagctccaatcctcttt
gccatggaagaatttcctcaactacgtgaagttgttgatcgagttgaaaaagatccaacg
aatgttgacattgctttagagtatcttgggaagagcaagggaatacagagggcaagagag
ctagccatggaacacgcaaatctcgcagcagctgcaatcgggtctctacctgaaacagat
aacgaagatgttaaaagatcgaggcgagcactaattgacttgacccatagagtcattacc
agaaacaagtga
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