Camelina sativa (false flax): 104789526
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Entry
104789526 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104789526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104789526
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104789526
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
104789526
NCBI-ProteinID:
XP_010513514
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Position
1:complement(13207262..13213671)
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AA seq
1119 aa
AA seq
DB search
MQRQRSILSFFQKPSSTQGLVSGNATSGGGGGGGSRFTVKEGDGKGDASVHSAVSKSVDE
VKGTDTPPEKVPRRVLPSGFKAAESVAGSGASSLFTNIMHKFVMVDDRDCSGARSREHVV
PLHDSSVCVKKDDNVFPEFRSNNGQSQERSHAFSFSGRADIRSVEDIGVDDDVPGPETPG
MRPSVSRLKRVLEDGMTSKENKVPVLDSNKRLKLLQDPVCGEKKEVKEGTKFEWLEPSRI
RDANRRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYEL
DAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR
GANTIILRKLVQVLTPSTASEGSIGPDAVHLLAIKEIKMELEKCSTVYGFAFVDCAALRF
WVGSISDDASCAALGALLMQVSPKEVVYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQV
MGDTDAAGVRNIIESKGYFKASSESWNCAVGGLNECDVALSALGELITHLSRLKLEDVLK
HGDIYPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLLRNWIC
HPLKDVVSINKRLDVVEELTANSEIIEITGQYLRKLPDLERLLGRIKSSVQSSTSVFPAL
LGKKVLKQRVKAFGQIVKGLRSGIDLLLALQKESNMMILLCKLCKLPVLVGKSGLELFLS
QFEAAIDSDFPNYQNQDMTEENAETLTVLIELFIERATQWSEVIHTISCLDVLRSFAVTA
SLSAGSMARPVIFPDSNQNQEIPGPILKIQGLWHPFAVAADGQLPVPNDILLGEARNSSN
SIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCETCELSLVDTIFTRLGASDRI
MTGESTFLVECTETASVLQNATQNSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRM
LFATHYHPLTKEFASHPRVTSKHMACAFKSRSDQELRGGCDQDLVFLYRLTEGACPESYG
LQVALMAGIPNQVVETASDAAQAMKRSIGENFKSSELRSEFSSLHEEWLKTLVDISRTSH
NDNTVVEDDHDMLVCLWHELKSSYCVAQVKADNLTPLSI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagagatcgattttgtctttctttcaaaaaccgtcgagtactcagggtttg
gtttccggcaatgctactagtggcggcggcggcggaggaggatcgcgatttactgtgaag
gaaggggatggtaaaggtgacgcttcggtacactctgctgtatcgaaatcggtggatgag
gttaaaggaacggatactccgccggagaaggttccgcgtcgtgtcttgccgtccggattt
aaggcggcggaatccgtcgccggaagtggagcttcgtcgctgttcactaatatcatgcat
aagtttgtgatggtcgatgatcgagattgttctggagcaaggagccgagaacatgttgtt
ccgcttcatgattcgtccgtatgtgtgaagaaggatgacaatgtttttcctgaatttcgt
tccaataatggtcagtctcaagaaagaagccatgcttttagcttcagtgggagagctgat
attagatcagtagaagatataggagttgatgatgatgttcctggtccagaaactccaggg
atgcgtccaagtgtttctcgtttgaagcgagttttggaggatggaatgacttctaaggag
aataaggtcccagtattggattctaacaaaaggctgaaattgcttcaagatccggtttgt
ggagagaagaaagaagtaaaggaaggaaccaaatttgaatggcttgagccttctcgaatc
agggacgctaacagacgacggcctgatgatcccctttacgacaggaagaccctatacata
ccacctgatgttttcaagaaaatgtctgcatcgcaaaagcaatattggagtgtcaagagt
gaatatatggatattgtcctgttctttaaagtgggaaaattttatgagctgtatgagcta
gatgcagaattaggtcacaaggagcttgactggaagatgaccatgagcggcgtgggaaaa
tgcagacaggtcggtatctctgaaagtgggatagatgaggctgtgcaaaagctattagcc
cgtggatataaagttggacgaatcgagcagctagaaacatctgaccaagcaaaagccaga
ggtgctaatactataattctaaggaagctagttcaggtattaactccatcaacagcaagc
gagggtagcatcgggcctgatgccgtccatcttcttgctataaaagagatcaaaatggag
ctagaaaagtgttcaactgtgtacggatttgcttttgttgactgtgctgccttgaggttt
tgggttggctccatcagcgatgatgcatcatgtgctgctcttggagctttattgatgcag
gtttctccaaaggaagtggtatatgacagtaaagggctatcaagagaagcccaaaaggct
ctaaggaaatatacattgacagggtctacggcggtacagttggctccagtaccacaagtg
atgggagatacggatgctgctggagttagaaatataatagaatctaagggatactttaaa
gcttcttctgaatcatggaactgtgctgttggtggtctaaatgaatgtgatgttgccctt
agtgcccttggagagttaattactcatctgtctaggctaaagctagaagatgtacttaaa
catggggatatttatccgtaccaagtttataggggttgtctcagaattgatggccagacg
atggtaaatcttgagatatttaacaatagctgtgatggtggtccttcagggaccttgtac
aaatatcttgataactgtgttagcccaactggtaagcggctcttaaggaattggatctgc
catccacttaaagatgtagtaagcatcaataaacggcttgatgtagttgaggagctcaca
gcaaactcagaaattattgaaatcactggccagtatctccgtaaacttccagacttagaa
agactcctcggacgcattaagtctagcgttcaatcatcaacctctgttttccctgctctt
ctggggaaaaaagtgctgaaacaacgagttaaagcattcgggcaaattgtgaaagggctc
agaagtggaattgatttgttgttggctctacagaaggaatcaaatatgatgattttgctt
tgtaaactctgtaaacttcctgtattagttggaaaaagtgggctagagctattcctttct
caattcgaagcagccatagatagcgactttccaaattatcagaaccaagatatgacagaa
gagaatgctgaaactctcacagtgcttattgaattatttatcgaaagagccactcaatgg
tctgaggttattcacaccataagctgcctagatgtcctgagatcttttgcagtcactgca
agtctctctgctggaagcatggcccgacctgttatttttcctgattcaaatcagaatcag
gaaataccagggccaatacttaaaatccaaggactatggcatccatttgcagttgcagct
gatggtcaattgcctgttccaaatgatatactccttggtgaggctagaaacagcagcaac
agcattcatcctcggtcgttgttactgacaggacctaacatgggtggaaaatcaactctt
ctgcgtgcaacatgtcttgccgttatctttgcccaacttggttgttatgtgccttgtgag
acatgtgaactctcccttgtggatactatcttcacaaggcttggcgcatctgatagaatc
atgactggagagagtaccttcttggtagaatgcactgagacagcgtcagttcttcagaat
gcaactcagaattcactagtaatccttgacgaactgggcagaggaactagtactttcgat
ggatacgccattgcatactcggtttttcgtcacctggtagagaaagtccaatgccggatg
ctgtttgcaacacattaccaccctctcaccaaggaattcgcgtctcacccacgtgtcacc
tcaaaacacatggcttgcgcattcaaatcaagatctgatcaagaactacgtggcggctgt
gaccaagacctagtgttcttgtaccgtttaaccgagggagcttgtcctgagagctacgga
cttcaagtagccctcatggctggaataccaaaccaagtggttgagacagcatcggacgct
gctcaagccatgaagagatcaattggggaaaacttcaagtcaagtgagctaaggtctgag
ttctcaagtctgcatgaagaatggctcaagacattggtggatatttctcgaacatcccac
aacgacaacaccgttgtcgaagatgaccatgacatgttggtttgcttatggcatgagctt
aaatcttcttactgtgttgcccaagtgaaggcggataacctaacacctctctctatctga
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