Cannabis sativa (hemp): 115698756
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Entry
115698756 CDS
T08987
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115698756
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115698756
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115698756
03036 Chromosome and associated proteins [BR:
csav03036
]
115698756
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115698756
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115698756
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115698756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
CLASP_N
Motif
Other DBs
NCBI-GeneID:
115698756
NCBI-ProteinID:
XP_030481782
LinkDB
All DBs
Position
8:complement(35688136..35695793)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHAHVLLAPLESLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDALKTELRSIYNQLCQDDMPMVR
RSAASNLGKFAATVEPAHLKLEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAS
AGRVTKFCRILSPELSIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LEMINNPHYLYRMTILRAISLLAPVMASEITCSKLLPVVVNASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFANQALQAIEHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgaaccgctttacccaatagctgttcttatagatgagctgaaaaat
gacgatatccagctacggttaaactctattcgtaggctatcaacaattgcacgagctctc
ggggaggagcgcactcgtaaagaattgatcccatttttgagtgaaaacaatgacgacgat
gatgaggtgctccttgcaatggcagaagaattgggggtgtttgtcccatatgttggtggg
gtggaacatgcccatgttctgcttgcacctctggaaagcctttgcacggttgaggaaacc
tgtgtaagggacaaagcggtggagtccttgtgtagaattgggtctcaaatgagggagagt
gatttggttgattggtttattcctcttgtaaagaggttagcagctggtgaatggttcact
gctcgagtttctgcatgtgggctttttcatattgcatatcctagtgcgccagatgcactg
aagacagaactgcgatcaatatacaaccaattgtgtcaagatgacatgccaatggtcagg
aggtctgctgcctcgaatctggggaaatttgcagcaactgttgaacccgctcatttgaag
ctagaaatcatgtcaatatttgatgatcttacccaagatgatcaagattctgttcgatta
ttggccgttgaggggtgtgcagctcttggaaaattgttggagccccaagattgtgttgca
catatcctccctgttattgttaacttctctcaggataagtcttggcgtgttcgttacatg
gtagcaaatcaactgtatgagctttgcgaagcagtggggcctgagccaacaaggacggac
ttggtccctgcatacgtgcggttgcttcgagataatgaggctgaagtacgtatagcatct
gctggccgagtgaccaaattttgccggattttgagtccagaactttcaattcagcatatt
cttccttgtgtgaaggaattgtcatcagattcttctcaacatgttcgatctgctttagct
tctgtgataatgggaatggctccaatcttaggaaaggatgcaacaattgaacagctcctt
ccaatttttctctctcttctgaaggatgaatttcctgatgtgcgtcttaatattattagc
aagcttgatcaagtgaatcaggttattggtattgatctgctgtctcaatccttattacca
gcgattgttgagcttgctgaggatagacattggagggtccggctagcaattatagagtat
ataccattattagctagccaattgggtgtaggcttttttgatgacaaacttggcgccctc
tgcatgcagtggttacaagataaggttcactccatccgtgatgcagctgctaacaacttg
aagcgtcttgcagaagaatttggtccagactgggcaatgcagcatataatcccccaggta
ttggagatgattaacaacccacattatttgtatcgtatgactatattgcgtgcaatctct
cttcttgccccagtcatggcttcagaaattacctgttcaaaactgctgcctgttgttgtc
aacgcatctaaggacagagtacccaacatcaagttcaacgtggctaaggtgctgcaatcg
ctcatcccaatagttgatcagtctgttgtagagaagacaattcgtccatgtctggttgag
ctgagtgaggaccctgatgtcgatgttcgtttctttgccaatcaagctcttcaagcaatt
gaacatgtaatgatgtctagctaa
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