Cannabis sativa (hemp): 115707980
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Entry
115707980 CDS
T08987
Name
(RefSeq) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00970
Aminoacyl-tRNA biosynthesis
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115707980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115707980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115707980
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
115707980
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class I (A)
115707980
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115707980
Prokaryotic type
Other AARSs
115707980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
115707980
NCBI-ProteinID:
XP_030491964
LinkDB
All DBs
Position
1:complement(100507836..100515845)
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AA seq
796 aa
AA seq
DB search
MPPTTKDSSSLDKEKILDLFLRIQLDERTAKNTLANAKVTTSLVTVIHEADVTEGCDRTI
GNLLYTVSTKYPANALVHRPTFLKYVVSSKIKTPAQLEAAFLFLTNIGSEDFKLEDFEVA
CGVGVEVSAEEIERTVNEVFEESKGVILEQRYRTNVGDLFANVRKREPWADPKIVKKLID
AKLYELLGERTAADDEKVPKKKKEKNPKAEEKKIIVSTPEPSEEDSNPFLIFPQPEENFK
VHTEVFFSDGSILRCCNTKELLEKHLKVTGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLA
KERGGGCYLRFDDTNPEAEKKEYIDHIKEIVKWMGWEPFKITYTSDYFQELFDLAVELIR
RGHAYVDHQTPTEIKEYREKKMNSPWRDRPIAESLKLFEDMRRGLIEEGKATLRMKQDMQ
SDNFNMYDLIAYRIKFTPHPHAGDKWCVYPSYDYAHCIVDSLENVTHSLCTLEFETRRAS
YYWLLHSLGIYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRG
VTSTAINTFVRGIGVTRSDCSMIRVDRLEFHIREELNKTSPRMMVVLHPLKVVITNLEAG
TAMDLDARKWPDGQADDACAFYKVPFSNVVYIERSDFRLKDSKDYYGLAPGKSVLLRYAF
PIKCTDVILADDKETVLEVRAEYDPSKKTKPKGVLHWVGEPSPGVDPINVEIRLFDRLFL
SENPGELEDWLADLNPQSKTVIHNAYAVSALGNAAVGDGFQFERLGYFVVDKDSTPEKPV
FNRTVTLRDSYNKSGK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaacgactaaagatagctcttctttggacaaggagaagattttggacctcttt
ctgcgtattcaattggatgaaaggactgcaaaaaacacccttgctaatgcaaaagtcact
accagtcttgttactgtcattcacgaggctgatgtaactgagggatgtgatcggactatt
ggcaatcttttgtacacggtttccaccaagtaccctgccaatgctcttgttcatcgcccg
acatttttaaaatatgttgtttcatcaaagattaaaactccagctcaattagaagctgca
tttttatttcttacaaacattggctctgaagattttaagttggaagattttgaagtggca
tgtggtgtaggtgtcgaggtttcagctgaagaaattgaaagaaccgtaaatgaggtgttt
gaagagagtaagggtgtcattttggagcaaaggtatcgaacaaacgtgggtgatttattc
gcaaatgttcggaagagggagccatgggctgatccaaaaattgtgaagaaactcattgat
gcaaaactatatgaattacttggtgaaaggactgctgcagatgatgaaaaggttcctaaa
aagaagaaagaaaaaaatcctaaagcagaggagaaaaagattattgtttctacgccagaa
ccatctgaagaagacagtaatccatttttgatttttcctcaaccagaggaaaactttaag
gtgcacactgaagttttctttagtgatggctccattctcagatgttgcaataccaaggag
ctgcttgaaaaacacttgaaagtgacaggagggaaagttttgactcgctttcctcctgaa
ccaaatggctatttgcatataggtcatgccaaggcaatgtttatagactttggactggct
aaagaaagaggtggtggatgctatctaaggtttgatgatacaaacccagaagctgagaag
aaagaatatattgatcatattaaagagattgtcaaatggatgggttgggagccatttaag
attacgtatactagcgattatttccaagagctatttgatttagctgtggagctgatacga
agaggtcatgcttatgttgatcaccagacacctactgagataaaggagtatagggaaaag
aagatgaatagtccttggagagacagacccattgctgaatctctgaaactctttgaggat
atgaggcggggtctcattgaagaaggaaaagcaacacttcgaatgaagcaagacatgcag
agtgataattttaatatgtatgatcttattgcatatcgaatcaagtttactccccatcca
catgctggagacaagtggtgtgtctatccaagttatgattatgctcactgtatcgttgat
tctcttgagaatgttacacattcgctctgtacccttgaattcgagacacgacgggcatcg
tactactggttgttgcactcactgggcatttaccaaccgtatgtctgggaatattcacgt
ttgaacatcagtaacactgtcatgtcaaagcgcaagttaaatcgattagtgacagaaaaa
tgggttgatggttgggatgaccctcgccttatgacactagcgggcttacggcgtaggggt
gtgacttcaactgcaattaacacgtttgttcgaggaattggagtcacgagaagtgattgt
agcatgattcgtgtggatcgtctggagtttcatattagagaagaattgaacaaaacatct
cctcgaatgatggttgttttacatccactaaaggttgttattaccaacttagaagctggc
actgcaatggaccttgacgctaggaaatggcccgatgggcaagctgatgacgcctgtgct
ttctacaaggttcccttttccaatgtagtgtatatcgaacgctctgattttcggttgaaa
gattcaaaagattactatgggcttgctcctggtaaatctgtgttactcagatacgctttc
cctatcaaatgtacggatgtcatcctagccgatgataaggaaactgttcttgaagttcgg
gccgagtatgatccttctaagaagacaaagccaaagggtgtcctacactgggttggtgag
ccttctcctggggttgacccaatcaatgtggaaattagattgtttgacagattattcctt
tccgagaatcctggtgaacttgaagactggcttgcggatttgaacccgcaatccaaaacg
gttatccacaatgcttatgctgtgtcagcgcttggaaatgcagctgtcggtgatggattt
cagtttgaacggcttgggtattttgtggtcgataaggattcaactccggagaagccggtc
tttaatcggacggtgacgcttagagacagctacaataagagtggaaagtag
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