Cannabis sativa (hemp): 115709871
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Entry
115709871 CDS
T08987
Name
(RefSeq) LOW QUALITY PROTEIN: isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00500
Starch and sucrose metabolism
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
115709871
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
115709871
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GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
pulA_all-beta
Motif
Other DBs
NCBI-GeneID:
115709871
NCBI-ProteinID:
XP_030493970
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Position
3:1870985..1876823
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AA seq
842 aa
AA seq
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MELHCYYHQWPYQTLTMSSSSIPCNAPKFHHYRHHHLLLLPNPLPFPSKGFSFTSNRKQN
YHRNTLTPTRRNPFIPNAGGGAKGAAFVVDEPKLGNFQVLKGYPAPLGATLCDGGVNFAV
YSGNAVSATLCLISVSDLEENRVSEEITLDPICNQTGSVWHVFLKGDFKDMLYGYKFDGE
FSPQDGHYFDPSRIVLDPYAKAVIRRGEFGALGSDGNCWPQMACMIPSIDDKFDWEGDLP
LKYPQKDLIIYEMHVRGFTRHESSGIEFPGTYIGAVEKLDHLKELGINCIELMPCHEFNE
LEYHSYNAIQGDYKVNFWGYSTVNYFSPMIRYSSVGTRNCGRDAVNELKLFIKEAHKRGI
EVIMDVVFNHTAEGNENGPILSFRGADNSAYYMIAPKGEFYNYSGCGNTFNCNHPIVRQF
IVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWNAVNVYGSPIEGDFLTIGTPLGSPPLID
MISNDPILHGVKLIAEAWDTGGLYQVGAFPHWGIWSEWNGKYRDTVRQFIKGTDGFSGAL
AECLCGSPNLYQKGGRKPWNSINFICAHDGFTLADLVTYNNKHNLANGEDNNDGESHNNS
WNCGQEGEFVSISVKKLRKRQMRNFFLCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY
VILETLLILFILDQVPIVNVIFTRPQINYFRWDKKEETSSDFFRFCCLVTKFRQECESLG
LDDFPTAERLQWHGHAPGVPDWSETSRFVAFSLKDSAKREIYVAFNSSHVPVTITLPERP
GHRWEPLIDTGKSAPYDILSPDLPGRDVALRQYAHFLDSNMYPMMSYSSIVLLLSPDEVE
II
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcactgctactatcaccaatggccataccaaaccctaacaatgtcatcttct
tcaattccctgcaatgctccaaaattccaccattatcgtcatcatcatcttcttcttctt
cctaaccctctgccatttccatccaagggttttagttttacttcaaatcggaagcaaaac
taccatcgaaacactctcactcccactcggagaaacccttttatcccaaatgcaggagga
ggagctaaaggcgccgcctttgtggtcgatgaacccaaattgggaaattttcaggtctta
aagggttatccggcgccgcttggtgctacgctttgtgatggtggtgttaattttgctgtc
tactctggcaatgcggtttctgccactctttgtttgatcagtgtttctgatttggaggag
aatagagtgagtgaggagataacacttgatcctatttgtaatcagactggaagtgtttgg
catgtttttctcaaaggggattttaaagatatgctttatggttataaatttgatggtgaa
ttttctccacaagatgggcattactttgatccttctcgtattgtattggatccatatgca
aaggcagtcattcgtagaggagagtttggagctttgggatcagatggaaattgttggccg
caaatggcatgcatgataccttctattgatgacaagtttgactgggaaggagatttgcct
cttaaatacccacaaaaagatcttattatttatgagatgcatgttagagggtttacgagg
catgaatctagcggaattgaattccccgggacttatatcggcgctgtggagaagcttgat
cacttaaaggaacttgggatcaactgtatagagctaatgccatgccacgagtttaatgag
cttgagtaccacagctacaatgccattcagggtgattataaggtaaacttttgggggtat
tctactgtcaattacttttcaccaatgatacgatattcatccgtgggcacacgtaattgc
ggacgtgatgcggtaaatgaacttaagctttttatcaaagaagcacataagcgaggaatt
gaggtgatcatggatgttgtatttaatcacacagctgaaggcaatgaaaatggtcctatt
ttgtcttttagaggtgctgataatagtgcttactacatgattgcacctaagggagagttt
tacaattactcgggatgtggtaacaccttcaattgcaaccatcctattgtgcgccaattt
atagtagactgcttaagatattgggtaacagaaatgcatgttgatggttttcggtttgat
cttgcttccatcatgaccaggagtagcagtctttggaatgctgtcaatgtatatggtagt
ccaattgaaggcgactttctcacaattggcacgcctcttggcagccctcctttgattgac
atgataagcaacgatccaatactccatggagtgaagcttatagctgaagcatgggatacc
ggtggtttgtaccaagttggcgcctttcctcactggggtatttggtcagaatggaatgga
aagtatcgagacacagtgcgacagtttataaagggtacagatggtttttcaggggctctg
gctgaatgcctttgtggaagcccgaatctctaccagaaaggaggaaggaaaccgtggaat
agtatcaattttatctgtgcacacgatggttttactttggcggatctggttacatataac
aataaacataacttggcaaatggagaagacaacaacgatggagagagtcataataatagc
tggaactgtggacaggagggagagtttgtaagcatttctgtgaagaaattaaggaagcga
cagatgcggaattttttcctttgcctcatggtttcccaaggtgttccaatgatatacatg
ggcgatgaatatggtcacacaaaaggcggaaacaacaatacatattgccacgataattat
gtgatcctcgaaactcttctgattctctttattctagatcaagttccaattgttaatgtg
atttttactaggccgcagatcaattactttcggtgggataagaaggaagagacctcgtcc
gacttcttcagattttgttgccttgtgaccaaattccgacaggaatgtgagtcacttggc
ttagatgactttccgacagcagagaggctgcagtggcatggccatgctcctggagtgcca
gactggtccgagacaagtcgctttgtggcctttagtctgaaagactcggcgaaaagagaa
atctatgttgccttcaattccagtcatgtaccagttaccattacgctgccagagcggcct
ggacacagatgggagccattgatcgacactggcaagtctgcaccttatgacatcctctct
cccgatcttccaggaagagatgtcgcgttgagacagtatgcacacttcctcgactcgaac
atgtaccctatgatgagttattcttccatcgttctattactctcaccggatgaagttgaa
atcatttga
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