Cannabis sativa (hemp): 115709943
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Entry
115709943 CDS
T08987
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00906
Carotenoid biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
115709943
Enzymes [BR:
csav01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
115709943
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
Pyr_redox_3
NAD_binding_8
FAD_binding_3
FAD_binding_2
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-GeneID:
115709943
NCBI-ProteinID:
XP_030494071
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Position
3:complement(91514219..91516420)
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AA seq
508 aa
AA seq
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MDTLLKTHNKLEFLHPLNGFYSEKLSNSYPTTTPKLHELRFGVKKSNPKWSKTTCVRASS
TSSALLELVPETKKENLDFELPLYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSI
DPCPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYISENSKKDLDRPYGRVNRKLLK
SKMLQKCISNGVKFHQAKVIKVIHEETKSFLICNDGVTIQASVVLDATGFSRCLVQYDKP
YNPGYQVAYGILAEVDSHPFDVDKMVFMDWRDSHLNNNLELKESNSKIPTFLYAMPFSKN
RIFLEETSLVARPGLPMRDIQERMVARLKHLGINVKSIEEDEHCVIPMGGPLPVLPQRVV
GIGGTAGMVHPSTGYMVARTLAAAPIVANSIVRYLGSDGGLSGHQLSTEVWKDLWPIERR
RQREFFCFGMDILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELLLFGLSLFSHA
SNTSRIEIMAKGTVPLVNMVNNLIQDRD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatactttacttaaaactcataacaagcttgaattcttgcatccacttaatgggttt
tattcagagaaattgagcaattcatacccaacaacaacacctaagcttcatgagcttaga
tttggtgttaagaaatctaacccgaaatggagtaagactacttgtgttagggctagtagt
actagtagtgctctattagaacttgtgccagaaaccaaaaaggagaatcttgattttgag
cttcctttgtatgacccatcaaagggtgttgtagtggaccttgctgttgttggtggcggt
ccagcggggttagccgtggcgcagcaagtatccgaagcagggctttcagtttgttccatt
gacccttgtccaaaattaatttggcctaacaattatggtgtttgggttgatgaatttgag
gccatggatttgcttgattgtcttgacactacttggtctggtgctgttgtgtatataagt
gaaaattccaagaaggatttagataggccttatgggagggtcaataggaagttgcttaag
tcaaaaatgctccaaaagtgtatatcaaatggtgttaagtttcatcaagctaaagttatt
aaggttatacatgaggaaactaaatcatttttgatttgtaatgatggtgttactattcaa
gcttctgttgttcttgatgccactggtttctctagatgtcttgtacaatatgataagcct
tataatccaggttaccaagttgcttatgggattttagctgaggttgatagtcacccattt
gatgtagataaaatggtttttatggattggagagattctcatctcaacaacaatttggag
ttaaaagagagtaatagtaaaatccctacttttctatatgcaatgcccttttcgaaaaac
aggatatttcttgaagaaacatctttagtagctcgacccggattacctatgagggatatt
caagaaagaatggtggctaggttaaagcatttggggataaatgtgaagagcattgaagaa
gatgagcattgtgttattccaatgggcgggccacttcccgtgcttcctcaaagagttgtt
ggtatcggtggtacagctgggatggttcacccttcaaccggttatatggtagcaagaacc
ttggctgcagctcctattgttgctaattccatagttcggtatttgggatctgatggaggc
ctttcgggacatcaattgtccaccgaagtttggaaagatctatggccgatagaaaggagg
agacaaagggagttcttctgtttcggtatggatattcttcttaaacttgatttgccagcc
acaagaaggttttttgatgcatttttcgatctagaacctcattattggcacgggttcttg
tcgtctagactattccttcccgagcttttactattcgggctttctctgttttctcatgcc
tccaatactagtagaatagaaatcatggctaagggaactgttcctttggtaaacatggtc
aataatctgatacaagatagagattag
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