Cannabis sativa (hemp): 115712983
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Entry
115712983 CDS
T08987
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115712983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115712983
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115712983
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115712983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
115712983
NCBI-ProteinID:
XP_030497298
LinkDB
All DBs
Position
4:complement(247483..256401)
Genome browser
AA seq
1171 aa
AA seq
DB search
MGTPGNFDELQELFRHHIQSFDHFVEAGLDTLLLCIKPITVYDPSTKTSLRIWLGKSHLF
APVKEQMLKTMKEPLLPFECRQAKISYTGKFMAEVCFEYNNKGVAIRDNFNFGQMPIMLK
SKLCHLRHADPQKLVSYKEESSEMGGYFIMNGLERVVRLIIMPKRNYPMSTVRSSFRDRR
EGYTDKAVIIRCVREDESSVTIKLYYLRNGSARLGFWVQGREYLLPVGIVLKALIDTTDH
EIYASLTCCYNEKYDKGKGVVGTQLLGERAQIILDEVRDLDLFNRIQCLEHIGEHFKPIM
HGLENASYSDIANAVLKDYIFVHLDNNHDKFNLLIFMAQKLFSFIDQTSVTDNPDSLQNH
EVLLPGHLITLYLKEKLEDWLSKVKKLLQDEIDKKGKPFDLGDLAQVKKVMDKAPAKQVS
LAIENLLKTGRIMTQTGLDLQQRAGYTVQAERLNYLRFVSHFRAVHRGASFAGLRTTSVR
KLLPESWGFLCPVHTPDGEPCGLLNHLTCNCRITSFYDSHGELRDFYKIRMSILNVLVQV
GMLPALPKLVQAGPPEVLSVLLDGRIVGSISSSVIEKVAAHLRKLKVSPVSGIPDDLEVG
YVPLSIDGTYPGLYLSTCPSRFVRPVKNISIPSTEDQNIELVGPFEQVFMEIKCPDGGDG
GRKEAFPATHEEIHPTGMLSMVANLTPWSDHNQSPRNMYQCQMGKQTMGFAIQALHCRAD
QKLYHLQTPQSPIVRTSTYTKYNLDEYPIGTNAIVAVLAYTGYDMEDAMILNKSSVDRGM
FRGQIYQTETIDLSDQGSRSERNQTMFRRSNVDKSMHSLIDSDGLPYVGQMINPNEPFCS
IYNEVTGHTRTSKRKGAEPAFVDYVSVDMKTKKNVHKASIRFRQPRNPIIGDKFSSRHGQ
KGVCSQLWPDIDMPFSEITGMRPDLIINPHAFPSRMTIGMLMESIAAKGGSLEGKFVNAT
PFSSSVKKADDGTESKSVKTLVDELGEKLKEKGFNFHGTEVLYSGVYGEELECNIFIGPV
YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGASYLLHDR
LHTCSDHHIANVCSLCGSLLTTSFIQNQKRVVPQVGGLPPRQSSRKIICHSCQSSKGMET
VAMPFVFRYLAAELAAMNIKMSLQLSNSATA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgccaggcaatttcgacgagttacaggaactgtttagacatcacatacagtcc
tttgatcattttgttgaagcaggattggatacattactactttgcattaagcctatcaca
gtctatgatccttccactaagaccagcctcaggatatggctggggaaatctcatttattt
gcaccggtaaaggaacaaatgttgaaaacgatgaaggagcctcttctcccttttgaatgt
cggcaggctaaaatctcttatacaggaaagttcatggctgaagtttgctttgagtataat
aataaaggagttgctataagagacaatttcaatttcgggcagatgcctataatgctaaag
tcaaagctttgccacttgagacatgctgatcctcagaagttagtttcatacaaagaagag
tcatcggagatgggtggttacttcatcatgaatgggcttgaaagagtcgttcgactcata
ataatgccaaaaaggaactatccaatgagtactgttcgtagttcatttcgtgatcggcga
gaaggatatactgataaagcagttattataagatgtgtaagggaagatgaatcttcagtg
acaatcaaattgtactaccttcgaaatggaagtgcaagacttggattctgggtacaggga
agagagtacttgcttcccgttggcattgttttaaaggcccttattgacacaactgatcac
gaaatttatgcgagcttgacctgctgctataatgagaagtatgataagggaaaaggtgtt
gttgggactcagctattgggggaaagagcacaaattattctagatgaagttcgagatttg
gacctttttaatcgtattcaatgtctagagcacattggagagcatttcaaacctattatg
catggacttgaaaacgcaagctattctgatattgcaaatgctgttctgaaggactacata
tttgttcaccttgataataatcacgacaagttcaatttgttgatttttatggcgcagaag
cttttttcattcatcgatcagacttcagtaacagacaaccccgattccctgcaaaatcac
gaagtcttactccctggtcacttgattaccctttatttgaaggaaaaattagaagattgg
ttgtccaaggtaaagaagcttcttcaagatgagatcgacaaaaagggcaaaccttttgat
ttgggcgacttggctcaagtaaagaaggttatggataaagctccggcaaaacaagtcagt
ttagctattgaaaaccttttaaaaaccggaagaattatgactcagactggtttagatttg
cagcagagggcaggctatacagttcaggcagagaggcttaattatctacgtttcgtttct
cattttcgtgcggttcatcgaggggcttcttttgcgggacttcgtacaaccagcgtgcgg
aagctgttacctgaatcttggggtttcctgtgccctgttcatacacctgatggcgaacct
tgtggcttgctaaatcatttgacttgcaattgccgaatcacatctttctacgattcacat
ggagaacttagagacttttacaagattagaatgtctatcctcaatgttttggttcaggtt
ggaatgttacctgcattgccgaagttggttcaagctggtcctccagaagttctttctgtt
ctattggacggtcgaatagttggttctatatcttctagtgtaattgagaaagtagcggct
catttacggaaactgaaagtctcacctgtttccgggattcccgatgatctcgaagtggga
tatgtacctttaagcatcgacggtacttatcctggtttatatctgtctacatgtccgtct
agatttgttcggccagtcaaaaatatttcaatcccttctaccgaagaccaaaatattgag
cttgtcggtccatttgagcaggttttcatggaaataaaatgccctgatggcggggatggt
ggaagaaaagaagcgtttcctgccactcacgaagaaatacatccaaccgggatgttaagt
atggtagctaatcttacaccttggtcagatcataatcagagtccacgtaacatgtaccag
tgtcagatgggaaagcaaacaatgggtttcgctatacaagcgcttcactgtcgtgctgat
caaaaactatatcatcttcagacgccgcaatctcccattgttcggacgagtacatatacg
aagtacaacttggatgagtatccaataggcacaaatgcaatagttgctgtacttgcatat
accggatacgatatggaagatgctatgattcttaataagtcatctgtcgatcgtggaatg
tttcgtggacaaatatatcagacagagacaattgatttatctgatcaaggaagcaggtct
gaaaggaatcaaacaatgtttagaagaagtaatgttgataaatcaatgcattctttgatt
gattcagatggcctcccttatgttggtcagatgataaatccgaacgaacccttttgttcc
atttacaatgaggtgacaggtcatacaagaaccagcaagcgaaaaggtgcagaacctgcg
tttgttgactatgtttctgttgacatgaagaccaagaaaaatgttcataaggccagtata
cgttttcgacaaccaaggaatcccattatcggtgataaatttagcagccgacatgggcag
aaaggtgtctgctcgcagttgtggcctgatatcgatatgccattttctgaaattacagga
atgcgtccggatcttattataaatcctcatgcgtttccttctcgaatgacaataggcatg
cttatggaatcaatcgctgcgaagggaggtagtttggaagggaaatttgtcaacgcgact
ccattttcgagttcagttaaaaaggctgatgatggaactgaatcgaaatctgtcaagaca
cttgttgatgaacttggtgaaaagttaaaagagaagggattcaatttccatggtactgag
gtattatacagtggggtttatggtgaagaactcgaatgtaacatctttatcggtcctgtc
tattatcaacgattacgacacatggtctccgataaatttcaggttcgatccacgggaact
atagaccaagtgacccgacaacccatcaaaggtcgaaaacgtggaggtggtattcgtttc
ggggagatggaaagagactccatgctcgcccacggagcttcatatttattacacgatagg
cttcatacatgttctgatcatcatattgctaacgtgtgttctctatgcggaagtctcctc
acaacatcctttattcagaaccaaaaacgagttgttcctcaggtgggcgggttacctcct
agacaatcgtcgagaaagatcatatgccattcgtgtcaatcgagtaaagggatggagaca
gtcgcaatgccctttgtttttcggtatttggctgcagagttagccgctatgaacataaaa
atgagcctccagctaagtaatagcgccacagcctga
DBGET
integrated database retrieval system
