Cannabis sativa (hemp): 115723504
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Entry
115723504 CDS
T08987
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115723504
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115723504
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
115723504
NCBI-ProteinID:
XP_030508860
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Position
9:5721111..5723541
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AA seq
424 aa
AA seq
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MSRLKICHTIISLIISFCLYAVINCEAKKPLLPPSRDTLRGTRLGSKAVPGEKIFNVKNF
GAIPNGRKDNTQAFMKTWVAACHFKGRARVLIPPGVYALGPLIFAGPCIGPSPIIVQVSG
TLKGDTDISLYEEPAWFQFENIDGLIVTGGGAFDGQGESAWKYNDCKNNNDCVQLPSNIK
LNKVSNAILRGFTSADSKGVHIFITNSQNIRLKRLHIVAPGDSPNTDGVHISTSINVKVS
KTIIATGDDCIGMIKGSTDVAINKVTCGPGHGISIGSLGKYENEEDVRGITVKNTTFLKT
DNGIRIKTWPGSTPSLATGMIFQDLVMDNVRNPIIIDQGYCPSGCKKQPSRVKISNIQYI
NIRGTSSSEVGVNLMCSPQYQCENIHLFNINLKHIGNGPISATCANARVSTFGGLQSPRV
TCHN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctagattaaaaatttgccataccattatcagtctgatcatatctttttgtctttat
gctgtgatcaattgtgaggccaaaaaaccactattgcctccaagtcgtgatacgttaagg
ggtaccagattgggcagtaaagctgttcctggtgagaaaatatttaatgtcaagaacttt
ggagccatcccaaatggaagaaaagataatacacaggctttcatgaaaacatgggttgca
gcatgccacttcaaaggaagagccagagttctgatcccaccaggggtttatgctctagga
ccactcatatttgcagggccatgcattggtccaagccctataattgttcaagtttcaggc
acattaaaaggtgatacagatatttccctctatgaagaacctgcatggtttcaattcgaa
aacatcgacggattaatcgtcaccggtggtggcgctttcgatggccaaggtgaatctgct
tggaaatacaacgattgcaaaaacaacaatgactgtgttcaactcccctctaacataaag
ttgaataaagtgtcaaatgcaatcttgagagggtttacatcagcagatagcaaaggggtt
cacatattcataacaaattctcagaacattaggctgaagaggcttcatatagttgcccca
ggtgatagcccaaatactgatggagttcatattagtacctcaatcaatgtcaaagtaagc
aaaactatcattgctactggtgatgattgcattggtatgatcaagggctccaccgatgtt
gccatcaacaaagttacttgtggccctggacatggcattagcattggtagcctgggaaaa
tatgagaatgaggaagatgttagaggaattacagtaaagaacaccacatttttgaaaaca
gataatggaattagaatcaagacatggccaggttcaactccaagtttagcaactggtatg
attttccaagacctagttatggataatgtaagaaaccccatcatcatcgaccaaggatat
tgtccaagtggttgcaagaaacagccatctcgagtaaagattagtaacattcaatacata
aacataagaggaacttcgagctcagaagtgggtgtgaatttgatgtgtagcccacaatat
cagtgtgagaatattcacctattcaatatcaacttgaaacatataggaaatggacccatc
tctgccacgtgtgccaatgcaagagtcagcacttttggtggcttacaaagcccacgtgta
acttgtcataattag
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