Clostridium saccharobutylicum: CLSA_c18920
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Entry
CLSA_c18920 CDS
T02876
Symbol
tetA
Name
(GenBank) tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csb02000
]
CLSA_c18920 (tetA)
01504 Antimicrobial resistance genes [BR:
csb01504
]
CLSA_c18920 (tetA)
Transporters [BR:
csb02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CLSA_c18920 (tetA)
Antimicrobial resistance genes [BR:
csb01504
]
Gene variants
Tetracycline resistance genes
Transporters
CLSA_c18920 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
PUCC
TRI12
Motif
Other DBs
NCBI-ProteinID:
AGX42877
UniProt:
U5MTZ1
LinkDB
All DBs
Position
complement(2128175..2129401)
Genome browser
AA seq
408 aa
AA seq
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MCKFESHNKQNTDQTVDKKALIFGLISVFLCGLGFTIIAPVIPFLVQPYISNPADQAIVV
TMLTSIYAVCVFFAAPVLGALSDKYGRRPLLLVCLLGSTIGYIVFGIGGALWVLFAGRII
DGITGGDISTIFAYFADIIPPEQRTKYFGWMSAVVGLGTIIGPTLGGLLAKFGYSVPMYF
GAIITLLNVVYGFFFMPESLDKNNRLKEITFIRLNPFIQLANILSMKNLKLLLISAFLLW
IPNGSLQAVFSQFTMDTFNWKPALIGLMFSIMGFQDIISQGFIMPKLLIRLSDKQIAILG
MISEIIGYSLIAASALLSFYPLFIVGMFIFGFGDSIFGPSFNGMLSKSVDSSEQGRIQGG
SQSIQSLARMIGPIIGGQMYVSLGHAAPAFMGIILIAAAIPVLYKKTH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaatttgaatcacataataaacaaaacacagaccaaaccgtggataaaaaggct
ttaatatttggtcttatatctgtatttctttgcggattaggcttcactataatagcacct
gtcattccattcttagttcaaccttatataagcaatccggcagatcaagctatagttgtt
acgatgcttacctcaatttatgcagtctgcgtgttttttgcagcccctgtacttggagct
ttaagcgacaaatatggtcgtcgtccattgctcttagtatgccttttgggttccacaatc
ggatacatagttttcggaataggaggagctctatgggtactatttgctgggcgcataata
gatggtataacaggcggagacataagcactatcttcgcatattttgcagacatcattcct
ccagagcagagaaccaaatactttggatggatgagtgcagttgtaggtttaggaaccatc
attggcccaactctaggcggattacttgctaagtttggttattctgtgccaatgtatttt
ggagcaataataactttattgaatgttgtttatggattcttttttatgcctgagagcctt
gataagaataatagactaaaagagattacctttataagactaaatccatttatacagctt
gcaaacatactttctatgaaaaacttaaaactgctgcttatctcagcattcttactttgg
atacctaacggatctttacaagcagttttttcacaatttacaatggacacttttaattgg
aaacctgcactaatcggacttatgttttcaattatgggctttcaagacatcatttcacaa
ggtttcataatgccaaagcttttgataagacttagtgataaacagattgcaattcttgga
atgatttcagaaattataggatacagccttattgcagcatcagctttgctctcattctat
cctctttttattgttggaatgtttatatttggttttggtgattcaatctttgggccttca
tttaatgggatgctctccaagtctgtagattctagtgaacaaggaaggattcaaggaggc
agccaatctattcaatctttagcaagaatgattgggcctatcattggaggccaaatgtat
gtatcacttggtcatgctgcacctgcttttatggggataatccttatagcagcagcaata
ccagttttgtataagaaaacacattaa
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