KEGG   Clostridium scindens: HDCHBGLK_00315
Entry
HDCHBGLK_00315    CDS       T06591                                 
Symbol
dpnM_1
Name
(GenBank) Modification methylase DpnIIA
  KO
K06223  DNA adenine methylase [EC:2.1.1.72]
Organism
csci  Clostridium scindens
Pathway
csci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HDCHBGLK_00315 (dpnM_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csci03032]
    HDCHBGLK_00315 (dpnM_1)
   03400 DNA repair and recombination proteins [BR:csci03400]
    HDCHBGLK_00315 (dpnM_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:csci02048]
    HDCHBGLK_00315 (dpnM_1)
Enzymes [BR:csci01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.72  site-specific DNA-methyltransferase (adenine-specific)
     HDCHBGLK_00315 (dpnM_1)
DNA replication proteins [BR:csci03032]
 Prokaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    HDCHBGLK_00315 (dpnM_1)
DNA repair and recombination proteins [BR:csci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HDCHBGLK_00315 (dpnM_1)
Prokaryotic defense system [BR:csci02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    HDCHBGLK_00315 (dpnM_1)
SSDB
Motif
Pfam: MethyltransfD12
Other DBs
NCBI-ProteinID: QBF72969
UniProt: A0A494WGD1
LinkDB
Position
complement(322433..323224)
AA seq 263 aa
MKSVLRYPGAKNRLAPWICEYIPKHDVYLEPFAGSLAVLFNKPKSHIETVNDLDGEVVNF
FRIVRDRESELRRAIELTPFSRSEYEAAYEQTEDELENARRFAIKCWMGFGCGNLYRNGF
KSGQQKNSPNPARAWAALPDTIELASERLREVQIEKLPAEELIGRYDTEDVFIYADPPYL
HGTRKNYLYKCEMSDEEHKELLGMLTRHPGKVLISGYDNDLYNSMLTGWNKTQKDTRAEG
GRKRTETLWMNYNLDSTQISLVI
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaagagtgtgctgagatatccaggagcaaagaatcgtcttgcaccgtggatatgtgaa
tatataccaaagcatgatgtgtatttagaacctttcgccggaagcctggctgtacttttt
aacaagccgaaaagtcatatcgagacagttaatgacttagatggagaggttgtaaacttc
tttcgaattgtgagagatagagaatcagagttgaggagagcgattgagttgacaccattc
tccagaagtgaatatgaagctgcatatgaacagacagaggatgaactggagaatgcgagg
aggtttgccattaagtgctggatgggttttggatgtggaaatttgtaccggaacggcttt
aaatctggtcagcaaaagaattcaccaaatccagccagagcatgggcggcacttcctgat
acgatagaattggcatcggagagattaagagaagtgcagattgagaaacttccggccgaa
gaactgattgggagatatgacacagaggatgtatttatttatgcggatcctccatatcta
catgggacacgtaagaattatttatataaatgtgaaatgtccgatgaagagcataaagaa
ttattggggatgcttaccagacatccaggaaaggtgctgatatcaggatatgataacgac
ctatataacagcatgcttactgggtggaataaaacacagaaggatacaagagccgaaggt
ggacggaaaaggacggaaacattgtggatgaattataaccttgatagcacacagatatcg
ttggttatctaa

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