Cryptotermes secundus (drywood termite): 111862234
Help
Entry
111862234 CDS
T07421
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111862234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111862234
Enzymes [BR:
csec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111862234
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111862234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111862234
NCBI-ProteinID:
XP_033606487
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MGKLKGRGHKILHLNPSALSFSIFTRDEVRKLSQVKITTPLSFNALGHPLKGGLYDPALG
PVSEKSDPCHTCSNNVYNCSGHMGYIELPLPVVNPLFHKTIFSILKLACLQCHTLQVKGF
AKSLFITKLKLLSEGLVTEAQETENIVGDFFSSDDDKVTDEVKAVLIKEKLDEYYQNIKK
ERSTYTTSLKTKFVESLMNDLLGAMENCVLDVKECLNCKDQLKKITSVQNKLMTTVYKSD
EASEGAKPVGENKGKIVLTVILPDESRDHLRKIWKNEKEFMSALSPLLESCDMEHPTDSF
FLDMIPVPPPKVRPVNFVGGKLVEHPQTQAYKLIVQDCIIIQNITKTMQDGNANSIPEEA
KSIIEQIQGKTLEEKLVLTWQGLQADVDRLMDSGMNRSSQKLQKVCPGIKQVIEKKEGVI
RMHMMGKRVNFAARSVITPDPCLNIEEIGIPEIFAKSLTYPVPVSEWNVADLRKMVLNGP
DVYPGAVMVENEDGSRTRISSTDQIQRGSVAKRLLTPGDTCDVSKGMKIVHRHLCSGDVL
LLNRQPTLHRPSIMAHVARILKGERTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEA
YNLLNVKNQYLVPKDGTPLSGLIQDHVVAGVHLSVRGRFFARDEYQQLVYQALSHKVGKI
KLLPPAILKPIPCWSGKQIISTVLVNIVPDGQYPINLTSTAKIADKAWITEEPRIWKGGG
TAFDDPNTMSEAEVIIRDGELLCGVLDKTHYGATPYGLVHCINELHGGACSSILLTAFSK
LFTAFLQRHGFSLGVEDILVVKDAEERRARFITHARKTGNKAVRSAFNLPKTATQNEMKE
KMEDIYQNKDKGRAIIDSSYKNCLDSITNKINKACIPTGLLKKFPHNNLQLMIQSGAKGS
SVNAMQISGLLGQIELEGRRPPHMISGKPLPSFARYDTAPRAGGFVDGRFMTGIKPQEFY
YHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLVVCYDLSVRDSDGSVVQFCYGEDGRD
VMKAQFLKKKQIPFLAENCKALKNFPVESLQDDETSSCITKCKKKIQKWKKRNGSPFQKN
RITPFTVFSVDIRKSDLQKSKKLNKKTGRSKCTKEICKLWRNADLDTLERYCHAGAKCPD
PVTTHFHGYRDFGALTEQLEQLMNDYLKTRTSEVKSDFRDVMYIKSMQSQSHPGEPVGLL
AAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLRELLMTASRNIKTPNMDIPFLPEVPH
LENRAEQLKLKLCRVTVSDILKHVDVTDKLETHPSRLQTYCIHFHFLPHEAYKSKFCVTP
SYVLHYVETQFFKNIFYAMRKKMKFRSSVIQFATKKSSKNEDANDEDAGPENVLEKQSDL
DMEDRARKAGVGEEHESSDEEVEGEDDDATIARSRQRHTENQEYEEPEEEEEDDSKFDKF
LDEGMEADENVEGSDKLEADSFLHDTAEGKQESNSEHHEHGDEDSQMFEADSDIPLLQGM
PVHVNVLSYEARRNRVISSVQFIVDYDYDTEQELWCKMKLALPLQYKRLDLTDLLREVAA
NSVVWEVPSLRRAITYVNPETQQLSLKTEGINFQEMFKYDKLLNLDQIYSNDIHKIADIY
GIEAARKVIVKEMQDVFKVYGIIVDPRHLLLIADYMTFSGKYEPFSRKTIEDNASPLQQM
SFESSVNFLKIAVTRGKRDDLVSPSSRLMVGQPFIGGTGMFSLLHKLSVS
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattaaaaggcagaggtcacaaaatactgcatctgaatcctagtgcattgtct
ttttctatatttacacgagatgaagttcggaaattaagccaagtgaagattaccactcca
ctgtcattcaatgctcttggtcacccgctgaaaggaggactttatgacccagcattaggt
ccagtaagtgagaaaagtgatccatgtcatacgtgttcaaacaatgtatacaattgttct
ggtcacatgggttacatagaacttccactgccagttgtaaatccattgttccataaaaca
attttcagcattctcaaattagcatgtttgcaatgtcacacacttcaagtgaaaggcttt
gctaaaagtttgtttataacaaagctaaaacttttgagtgaaggtcttgtaacagaagct
caagaaacagaaaatatagttggagatttcttttcatcagatgatgacaaggtaactgat
gaagtaaaggcagtgctgattaaggagaaattggatgagtactaccaaaatataaagaaa
gagagaagtacatatacgacatccctgaagacaaaatttgtggaatccttaatgaatgat
cttcttggtgcaatggaaaattgtgtgctggatgtcaaggagtgtttaaattgtaaagat
caattgaagaaaattacatcagttcaaaataaactaatgactacagtctataaatctgat
gaagcatctgaaggagcaaaacctgttggagaaaataaagggaaaatagttttgactgta
atcttgcctgatgaatcaagggatcatttacgtaagatttggaagaatgaaaaggaattc
atgagtgccctttcaccattgttggaaagctgtgacatggaacatcccactgattctttc
tttcttgatatgataccagttccaccacccaaagtgaggccagttaattttgttggcggt
aagttagttgagcatccacaaacacaagcttacaaactcattgttcaagactgcataata
atccaaaatattaccaagacaatgcaagatgggaacgcaaacagcataccagaagaagca
aagagcataatagaacagattcaagggaagactcttgaagagaagttagttctaacgtgg
caggggctgcaggctgatgtggatcgcttgatggatagtggtatgaaccggtcttcacag
aagcttcagaaagtttgcccaggcatcaagcaggtgatagagaagaaagaaggtgttata
cgaatgcacatgatgggaaagcgagttaactttgccgctcgttcagttattactccagat
ccatgtctgaacattgaagaaattggtattccggaaatatttgccaaatctttaacatat
cctgtgcctgtttctgagtggaatgtggctgatttacgcaagatggttttgaatggacct
gatgtttatccaggagctgtaatggtagagaatgaggatggtagcagaaccagaatatcc
tccactgaccaaattcaacgaggaagtgttgcaaaacgtctcttgactcctggagacaca
tgtgatgtatcgaaaggaatgaaaatagtacatagacatctttgtagtggagatgtgtta
cttttgaacagacagcccactttgcatcgacccagcatcatggcacacgttgcacgcatt
ctgaagggagagagaacgttacgacttcactatgccaactgcaaagcatacaatgctgat
tttgatggtgatgaaatgaatgctcatttccctcagaacgaactggctcgcagtgaagcg
tataatctgctgaatgtgaagaaccagtatttagtgccaaaagatggtacaccactgagt
ggtttgattcaagatcatgttgtagcaggagtacatctttcagttcgaggaagatttttt
gcaagggatgagtatcagcagcttgtttatcaggcactgagtcataaagtgggaaagata
aaactgttaccaccagcaattctgaagccaatcccctgttggtctgggaagcagataatt
tcaacagtgcttgttaatattgtacctgatggacagtatccaattaatcttacatcaact
gccaaaattgcagataaggcatggataactgaagaacctcggatatggaagggaggagga
actgcatttgatgatccaaataccatgtcagaagcagaagtaattattcgagatggagaa
cttttatgtggtgtcctggataaaacccattatggtgctaccccatatggactggtgcat
tgcataaatgagttacatggaggcgcatgttcaagcatattgctgacagcattttcgaaa
ctgttcactgcatttctccagagacacggtttctctcttggagttgaagatattttggtg
gtaaaggatgcagaggaacgacgagcgcgcttcatcactcatgcacgaaaaactggcaac
aaggctgtgcgatctgcgtttaatcttccaaaaacagcaacacaaaatgagatgaaagaa
aagatggaagacatataccaaaacaaagacaaaggaagagccatcattgacagttcatac
aagaattgtcttgacagtatcaccaacaaaataaacaaggcttgcattcctactggtctt
ctgaaaaaattcccgcacaacaacttgcagcttatgattcagtctggggctaaaggctcc
tctgtaaatgccatgcagatctctggcttgttgggccaaatagaattggaaggcaggcga
ccaccacacatgatatctgggaagccacttccaagcttcgctagatatgacacagctcca
agagcaggaggttttgtggatgggcgattcatgactggaataaagccacaggagttttat
taccattgcatggctggcagggagggcttgattgatacagctgtgaaaacaagcaggagt
ggatatcttcaacgatgtttggtcaaacacttggagggtttagtggtttgctatgatttg
tctgtcagggacagtgatggaagtgttgttcagttctgctatggagaggatggaagagat
gtcatgaaagcccagtttctgaagaagaagcaaatccccttccttgcagagaattgtaaa
gcactcaagaatttccccgtagaaagtttgcaagatgatgaaacttcatcctgcataacc
aagtgcaagaaaaagattcagaaatggaagaaaaggaatggaagcccctttcagaagaat
agaattactccatttactgtgttctctgttgatataaggaagtcagatttgcaaaaatcg
aagaaattgaacaagaaaactggaagatctaaatgtactaaagaaatctgcaaactttgg
agaaatgcagatttggacacactggaaagatattgccatgcaggtgccaagtgccctgat
cctgtcactacacattttcatggttaccgtgactttggagctctcacagagcaattggag
cagctcatgaatgattatttaaaaacccggacttctgaagtgaagtctgactttcgtgat
gtgatgtacataaaatcaatgcagtctcagtcacaccctggagaacctgttggtctgctg
gcagcccagtctgttggggagccatccacccaaatgactctcaacacatttcactttgct
ggacgaggtgagatgaatgttacccttggtatacctcgattgcgtgaactgctcatgact
gcctcaagaaacatcaagactcctaatatggacataccatttcttccagaagtaccacat
ttagagaacagggctgagcagttgaaactgaagctttgcagagtaacagtttctgatatt
ttgaagcatgttgatgtgacagataagcttgagacacatccgtccaggctgcagacctac
tgtatacatttccactttcttccacacgaggcttacaagtccaagttttgcgtgacacct
tcatatgttctccattatgttgagacacagtttttcaagaacatattttatgctatgaga
aaaaaaatgaaattcagaagttctgtcattcagtttgcaacaaagaagtcatcaaaaaat
gaagatgctaatgatgaagatgctggtccagaaaatgtgctggaaaagcagtcagatctt
gatatggaggacagagctaggaaggctggtgttggagaagaacatgagagctctgatgaa
gaggtagagggtgaagatgatgatgctaccattgctcgcagcagacagaggcacacagag
aatcaggaatatgaggagccagaggaggaggaagaggatgattctaagtttgataaattt
ctagatgaggggatggaagcagatgagaatgtggaaggaagtgataaattggaagctgat
agtttcctgcatgacacagctgaaggtaaacaggagtccaacagtgaacatcatgagcat
ggagatgaagacagtcagatgtttgaggctgacagtgacattccgctccttcaggggatg
cctgtacatgtgaatgtccttagttatgaggctaggcgaaacagagtgatttcctcagtg
cagttcatagtggattatgattatgacactgaacaagaactttggtgtaaaatgaagtta
gcactgccgttgcagtataagcgacttgatttaacagatctgctgagagaggtggctgcc
aattcagtagtctgggaagtaccttctctcagaagagctattacatatgtcaacccagaa
acacaacagctctcactgaagacagaaggcatcaactttcaggaaatgtttaaatatgac
aagcttctcaaccttgaccagatatactccaatgatattcataaaatagctgacatttat
ggaattgaagctgccaggaaagtcatcgtgaaggaaatgcaggatgtattcaaagtgtac
ggcatcatagtggacccgcgccaccttctgctcatcgccgactacatgaccttcagtgga
aagtatgaacctttcagtcggaaaaccattgaagacaacgcatctcctctgcagcagatg
tcgtttgagtcttctgttaattttttgaagatagcagtgacacggggtaaacgggatgac
ctggtgtccccttcgagtcggctaatggttggacagcccttcattggtggaacgggaatg
ttctcacttctgcacaagctgtcggtttcctga
DBGET
integrated database retrieval system
