Cryptotermes secundus (drywood termite): 111867917
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Entry
111867917 CDS
T07421
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111867917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csec03400
]
111867917
DNA repair and recombination proteins [BR:
csec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111867917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
PilJ
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
111867917
NCBI-ProteinID:
XP_023713906
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MAQKNTLFNYFTKSPAQSKVQSGVGVVSPSEAKDKIVQKSSAGTPLSARKKVSKKLTPET
DSKKITRTAAPVAERNKLYEGEEFGVYDIVWSKLDGYPWWPSLVCEHPKQKIHVKGNDIH
VQFFDDPPTRAWIHKKCMERYVDGVKMLAPTKDKDKWRAACIQADSALKLSNLERSKLIV
DYPDDSASDIELEDEETEDLDTGNQGVAQEDASIPQKRRRILVLDSEDSEDEYKPKKEDL
DEQSESASSGIDSDEVSGPESIEEPEEGTPRKANKRKRTSQSRPSKKSKTADQNSTPLNA
VSTETKAKLALFPSDENSAVKMNGFEGFSSPSQMVKDGTKAKLALFSSKENTEAKQTEAG
STEAWPHLKLDFLKPNKIRDAKRRTPADPDYDPKTLYVPEEFKRNLTPALRQWWEMKSQH
FDCILFFKVGKFYELFHMDAVTGVTELGLQYMRGDNAHSGFPEIAYGRFASSLIEKGYKV
ARIEQTETPEMMGERCKGMGKVTKFDKVVKREICQITAKGTRVFSVIDGDASSAENSYLF
AVTEKSAGDSVSYGICFIDTSIGVFHLGQFVDDRHCSRLRTLVAHHPPVQVLYEKRALSE
KTLQLLNSSLASVLKESLAPETEFWSAHKTLTTLAEGGYFSSESSGVNWPEGLKKFLNEA
DTLGLTAHDNYELAVRALGACTWYLKESFLDQQLLSMGRFEIYQPHDLVENARPVLTVVS
KASFSKHMILDGITLCNLNIVNDSSGENDGTLLQKLDLCCTPFGKRLLRHWLCSPLCDVD
GIAARQEAITWLLGNTSLMAEAQEMLSQLPDLERLLSKVHTEGNALRSQTHPDSRAIFFE
DHIYSKRRILEFISTLAGFKSAEKIASLIQGELATSSSKLLVQCTSNKQQNPAGKFPDLA
GALHFFETAFDHEQAKEAGRINPSKGIDPEYDSVMEELQGLKQELDEYLNSQRKYFGCKV
TYCGSDKKRFQLEVPDSFTKKAGKDYELQGQRKGFKKYWTSETKELLSRQIAAEDQQKTV
LKDLNRRIFARFSSYYEIWNTAVQCLSVLDVMMSLAEYVRSEGGEMCVPEFVMPPEEMKP
FLKITDGRHPCVSSVDGFIPNDTAIGCGEDAASLVLVTGPNMGGKSTLMRQVGLLVVMAH
MGCHVPAASCHLSPVDRIFTRLGANDDIMAGESTFYVELSETAAVLHHATKHSLVLVDEL
GRGTSTHDGTAIAAAVVQELGNLGCRTLFSTHYHTLVEDFRHSEYVTLGHMACMVENENE
EDPSEETVTFLYKFASGACPKSYGFNAARLAGIPSDIIRTGYNKAAQLEKDGDQRKLFQQ
LFGKKQNSSDITSLIERVRSVL
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaaaaatactttatttaattatttcacgaaatcgcccgcacagtcgaaagta
cagagtggagtcggagtagtttcgccttcggaagcaaaggacaaaattgtacaaaaatct
agtgcaggtacccctctatcagcaaggaagaaagtgtcaaaaaaattaactcctgaaaca
gatagcaaaaagattactagaaccgcagctcctgtagcagagcgcaacaaactatatgaa
ggagaagagtttggtgtgtatgatatagtttggtcaaagttagatggttacccttggtgg
ccaagtttggtctgtgaacatccaaaacaaaaaattcatgttaaaggaaatgacattcat
gtgcagttttttgatgatccacctacaagagcatggattcacaaaaagtgtatggagaga
tacgtagatggagtgaaaatgttagctccgactaaagataaagacaaatggagagcggcc
tgcatccaggctgattctgctctgaagctttcaaacttggagcgcagcaaacttattgtt
gattatcctgatgattcagctagtgatattgaacttgaagatgaagaaactgaagatctg
gacacgggaaatcaaggcgttgctcaggaagatgctagtattccacagaagaggagacgg
atccttgtattggacagtgaggattcagaggatgaatacaaacctaaaaaggaagatctt
gatgagcaatcagagtctgcaagttctggtattgattctgatgaagtgtcaggtcctgag
agcattgaagaacctgaagaaggaactcctcggaaggcaaataaacgaaaacgaacctca
cagagtaggccatcaaagaagagtaaaactgctgatcagaattcaacaccattgaatgca
gttagtacagaaacaaaagcaaagttagctttgtttccctcagacgagaattcagctgtt
aaaatgaatggctttgaaggttttagttcaccttcacagatggttaaggatggaacaaaa
gcaaagctagcactcttttcatccaaagagaacacagaagcaaagcaaactgaagctgga
agtacagaagcatggccccatttgaagcttgatttcttgaaaccaaataagatccgtgat
gccaagaggcggactcctgcagatcctgattatgaccccaagacactctatgtacctgaa
gaatttaaaagaaatctgactcctgcactgaggcagtggtgggagatgaaatcccagcac
tttgattgtattctgttcttcaaagttgggaaattctatgaactcttccatatggatgct
gtgacaggtgtcactgaacttggattgcagtacatgaggggagataatgcgcattctgga
tttcctgaaatagcctatgggagatttgccagcagccttatagagaaaggctacaaggtg
gctcgtattgagcagactgagacaccagagatgatgggggaacgctgcaaaggaatgggg
aaagttaccaaatttgataaggtagtgaagagagaaatatgccagattacagcaaaggga
accagagtcttcagtgttattgatggggatgcgagcagtgcagaaaatagttaccttttt
gctgtcactgagaagtctgcaggggattctgtttcatatggaatatgttttattgataca
tcgattggagtatttcatttgggacagtttgttgatgatagacattgttcacgtctgagg
accctggttgctcaccatccacctgtacaggtgttgtacgagaagagagctctctctgaa
aaaacattacagcttcttaactcatccttggcatcagtgctgaaagaatcccttgctcct
gaaacagaattttggagtgctcacaagacactaacaacattagcagaagggggttatttc
tcttcagaatcttcaggagtaaattggccagaggggctgaagaaatttctgaatgaagct
gacaccttgggacttactgcccatgataactatgaattagctgtgcgggctttgggcgct
tgcacttggtatctgaaggaaagttttttggatcagcagctgttatccatgggaaggttt
gagatctatcagccacacgatctagtagaaaatgcgaggcccgtcttgactgtggtctcc
aaggcttccttcagcaagcacatgattttggatggcataacactgtgcaatctaaacatt
gtcaatgacagttctggtgaaaatgatggaactttgttacagaaattggacctttgctgc
acaccttttggaaagcggttattacgtcactggctgtgcagtcctctctgtgatgttgat
ggtattgcagcgcgacaagaggctatcacatggctgttgggtaacacatcattaatggct
gaagctcaagaaatgcttagtcaactaccagatctagaaaggttgctaagcaaggttcac
acagagggcaatgcattaagaagccaaactcatccagacagtcgagcaatcttcttcgag
gaccatatatactcaaagagaagaatattagaatttatatcaactttggcaggttttaaa
tctgcagaaaaaatagcttcactgattcaaggtgaacttgcaacatcaagctcaaagtta
ttggtgcagtgtactagcaataaacagcagaatccagctgggaaatttcctgatcttgca
ggtgctcttcacttttttgagactgcatttgaccatgaacaggccaaggaagctggtcgt
atcaacccaagtaaaggtattgatccagagtacgattctgtgatggaagaattgcagggg
ttaaaacaggagttagatgagtacctgaacagccaaaggaagtattttggatgtaaggtg
acatattgtgggtctgacaagaagagatttcaacttgaagttcctgatagctttaccaaa
aaggctggaaaagattatgaacttcagggacaaaggaaaggattcaagaagtactggact
tctgagactaaggagctgctgtcccgtcaaattgctgcagaagatcaacagaaaactgta
ttaaaggatttaaatcgcaggatatttgccagatttagttcatactatgaaatatggaat
acagcagtacagtgtctgtctgtgttggatgttatgatgtcgcttgctgaatatgtgcgt
agtgaaggaggtgaaatgtgcgtcccagaatttgttatgccacccgaggaaatgaagccc
ttcttgaagatcacggacggtcgtcatccttgtgtttcatcagtggatggattcattcca
aatgatactgcgattggatgcggagaagatgcagctagtctggtactagtaacaggacca
aacatgggagggaaatctactctcatgcgtcaagttggtctcctggttgtaatggctcat
atgggttgccatgtcccagctgcttcctgtcatctcagccctgtggatcgcatattcacc
cgtctgggagctaatgacgacatcatggcaggggagagcactttctatgtggagctgagt
gagacagctgcagtgctgcaccatgcaacaaaacattcccttgttcttgtagatgagctg
ggacgtggaacgtcaacacatgacggcactgcaattgctgcagctgttgtgcaagaattg
ggaaatttaggatgccgaacattgttttctacacattaccacactctggtggaagacttc
agacattcagaatatgtcacattgggccacatggcatgcatggtagagaatgagaatgaa
gaagatccatcggaagaaaccgtgactttcctgtataaatttgcgtctggtgcttgtcca
aagtcttatggttttaatgctgctcgtcttgctggaattccatctgatatcattcgcact
ggctacaacaaagctgcccaacttgagaaagatggagatcaaaggaaattgttccagcag
ttgtttggtaaaaagcagaactcatcagatataacttcactgattgaacgggttcggtca
gtactttga
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