Citrobacter sedlakii: JY391_16555
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Entry
JY391_16555 CDS
T07832
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00730
Thiamine metabolism
csed01100
Metabolic pathways
csed01240
Biosynthesis of cofactors
csed04122
Sulfur relay system
Module
csed_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JY391_16555 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JY391_16555 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csed03016
]
JY391_16555 (thiI)
Enzymes [BR:
csed01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JY391_16555 (thiI)
Transfer RNA biogenesis [BR:
csed03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JY391_16555 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QUC29127
LinkDB
All DBs
Position
complement(3439660..3441108)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDESQR
LMIREALTRIPGIHHILEVEDVPFTDLHDIFEKALVEYRDRLEGKTFCVRVKRRGKHAFS
SIEVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLIIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRYGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLIAYDKEHIINIAREIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILDNVVAEASNVDIREIAQQTEQEVVEVETVSGFGPNDAILDIRSIDEQD
DKPLKVEGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcactatcaaaagccaatctgtgcgtttg
cgctttataaaaattctgaccgggaacattcgtaacgttttaaagcactatgatgaaacc
cttgctgtcgttcgccactgggataacatcgaagtacgcgctaaggatgaaagccagcgc
ctgatgattcgcgaggcgctgacccgcattccgggtatccaccatatccttgaagtggaa
gatgtgccgttcaccgacctgcacgatatcttcgagaaagcgctggtggagtaccgcgac
cgtctggaaggcaaaaccttctgcgtacgtgtgaagcgtcgcggtaagcatgcgtttagc
tccatcgaagtggaacgttacgtgggcggcggattaaatcagcatattgaatctgcgcgc
gtgaagctgaccaacccggatgtaacggtgcatcttgaagttgaagatgaccgtctgctg
atcatcaaaggtcgctatgaagggattggcggtttcccgatcggtacccaggaagacgtg
ctgtcgctgatttcaggcggttttgactctggcgtttccagttacatgttgatgcgtcgc
ggctgccgcgtacattactgcttctttaatcttggcggcgcggcgcatgaaatcggtgtt
cgccaggtggcgcattacctgtggaaccgttacggcagttcgcaccgcgtccgctttgtc
gccattaactttgagccggtggtcggtgagatcctcgaaaaggtcgacgatggccagatg
ggcgtcgtgcttaagcgcatgatggtgcgcgcagcgtcgaaagtggcggagcggtatggt
gtgcaggcgctggtgacgggcgaagcgctggggcaggtttccagtcagacgctgaccaac
ctgcgtttgattgataatgtctctgataccctgattcttcgtccgttgatcgcatacgac
aaagagcacatcatcaatatcgcccgcgaaattggtaccgaagatttcgcccgcacgatg
ccggaatactgcggcgtgatctcaaaaagtccgacggtgaaagccatcaaggcgaaaatt
gaagcggaagaagagaacttcgatttcagcattcttgataacgtggtggcggaagccagc
aacgtcgatatccgcgagatcgcccaacagaccgagcaggaggtggttgaagtggagacc
gtcagcggcttcggcccgaacgacgcgatcctcgatatccgctccatcgatgagcaggac
gacaaaccgctgaaggtggaaggcgtggatgtggtttccctgccgttctacaagctgagc
accaaattcggcgatctcgatcagagcaaaacctggctgctgtggtgcgagcgcggcgtg
atgagccgcctacaggcgctttatctgcgcgagcagggctttgagaacgtgaaggtttac
cgtccgtaa
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