Cynoglossus semilaevis (tongue sole): 103381919
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Entry
103381919 CDS
T04866
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03020
RNA polymerase
csem04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103381919 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103381919 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103381919 (polr3a)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103381919 (polr3a)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103381919 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
103381919
NCBI-ProteinID:
XP_008312740
UniProt:
A0A3P8WF48
LinkDB
All DBs
Position
8:8843111..8859060
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCQTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLSKE
ERQQFTDFLKRPNLPYLQKRGLKKKISDKCRKKTICLNCSAFNGSVKKCGLLKIIHEKYK
TTKKVVEPFVSDFLQSFDIAIEHNKVMEPLLPRAQENLNPLVVLNLFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPDVHPGANF
IENRMNHIKRFLKYGNREKIAQELRIGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIVASILVGKDDKVRVSLPHPAIIKPMALWTGKQI
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYSCPDEPALSQNELVLTADAVMKRQDFLC
CRETFLEEIRKFIRSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEELPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPVPVQRPLLFD
NADFHIPLLT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcagttcagagagacagatgtggctaagaaaataagccacatctgtttc
gggatgaaatctgctgaacagatgcgtcagcaggctcacattcaggtggtcagcaaaaat
ctgtacagccaagacaccaaacatacaccgctgccctatggagtgttggaccaccgaatg
ggcaccagtgaaaaagacaggccgtgtcagacctgtgggaagaatctggctgattgtctg
ggacattatggatacctggatctggagcttccatgttttcatgtcggttacttcaaagca
atcattggaatcttgcagatgatttgcaagacatgttcaagcataatgttgtcgaaagaa
gagagacagcagttcactgatttcctgaagcgacccaacctgccatatctgcagaaacga
gggctgaagaagaaaatctctgataaatgtcgcaaaaagacaatctgtctgaactgttcc
gcctttaacggatcggtaaaaaagtgtgggcttctcaaaatcatccatgagaaatacaag
accaccaaaaaagtggtggaaccttttgtgtcagatttcctgcagtcctttgacattgcc
atagagcacaacaaagtgatggagccactgctgccccgagcacaggaaaacttgaaccct
ctcgtggttctcaacctcttcaaacggatccctcaggaagacattccactccttctgatg
aacccagaagcaggcaaacctgcagacctcattcttacccgcctcctggtgccgcctcta
tgcataagaccctcagtggtcagtgacctgaagtcaggcaccaacgaggacgacctcacc
atgaagctcacagagataatcttcctcaatgatgtgattaaaaagcatcgaatgacaggc
gctaagacgcagatgatcatggaggactgggatttcttgcagctccagtgtgccctctac
atcaacagtgagctatcgggcattcctctaaacatggctccgaaaaagtggaccagagga
tttgtgcagagactgaaggggaaacaaggtcggttcagaggaaacctctcaggtaaaaga
gtggacttctctgggagaaccgtcatctctccagaccctaatctaaggatcgatgaagtg
gccgtaccagtacatgtggcaaaaattctcacctatccagagaaggtaaacaaggccaat
ttggagctgatgagaaaactagtccgcaacggtcctgacgttcaccccggagcgaacttc
attgagaatcgtatgaatcatattaaaaggtttctaaaatatggaaaccgagaaaagatc
gcccaggagctcaggatcggtgacgtggtcgaaaggcacctcattgacggagacatcgtc
ctctttaatcgacagccttctctacacaaactcagcattatggcccacattgccagagta
aaacctcacagaacgtttaggttcaacgagtgcgtgtgcacaccgtacaacgccgacttc
gacggagatgaaatgaaccttcatctacctcagaccgaagaggcgaaagctgaagccctc
gtcctgatggggacaaaagctaatcttgtcactccaagaaatggggaacctttgattgca
gctattcaagactttctcacaggtgcctacctcctgactctgaaggacaccttctttgac
agagccaaagcttgtcagatagtggcatcaatactggtgggcaaggatgataaagtcaga
gtctctctccctcaccctgccatcataaagcccatggctctgtggacagggaagcagatt
ttcagcctcattctgaagccaagtgacgattgtccagtcaaggccaacctgcgaaccaag
ggcaaacaatactgcggcaaaggggaagatctctgtcacaatgactcgttcgtggttatc
cacaacagtgagctgatgtgtggcagcatggacaagggcaccttgggctctggctctaaa
aacaacattttttacatcctgctgagagactggggacaactggaagctgcaaatgccatg
tcccgcctggcaagactggctccagtgtatctctccaatcgaggcttttccattggtatt
ggtgatgtgacccctggccagggtctgctgaaggccaaacaggacctgttggatgatggt
tacaagaaatgtgatgagtatatcgaagctttacaaacaggcaagttgcagcaacagcca
ggttgcaccgcagaagagaccctggaggctctcattttaagggaactgtctgtcatcaga
gacagagctggcagcgcctgcctcagggagctggataagagcaacagccctttgattatg
gctctttgtgggtccaaagggtccttcattaacatctctcagatgattgcctgtgtaggt
cagcaggccataagtggctctcgagttccagatggatttgaaaatcgttccctgcctcat
tttgagaaacactcaaaactgcctgcagctaaagggtttgtggctgacagtttttattca
ggcctgactccaactgagtttttctttcataccatggctggtcgagagggtttggtggac
actgctgtgaaaactgcagagactggatatatgcagaggcgacttgtaaagtctctggaa
gatctgtgctcgcagtacgacctgacggtgcgcagctccaccggtgacatcatccagttc
atttatggcggtgatggtctggacccggccgcaatggagggaaaggacgagccactggag
tttaaaagagtgctagacaacatcagggctgtctattcgtgtccagatgagcctgcgctc
agtcagaatgagctggttctcactgcagatgctgtaatgaagaggcaagactttttgtgc
tgcagagaaacgtttttagaggagattaggaaattcatcaggagcatctcagaaaggatc
aagaagaccagagacaaatacggaatcaatgacaatggcaccagtgagccaaaggttctc
tatcagctggatcgtattactcccactcagcttgaaaagttccttgaaacttgcagagac
aagtacatgagagcacagatggagcctggctcggcagttggtgccctgtgtgctcagagc
attggagagcccggtacacagatgaccctgaaaacctttcactttgccggcgtggcgtcc
atgaatatcacattgggggtgcctcgtatcaaagagatcattaatgcttccaagaacatt
agcacacccataatcaccgcacatctggacgtggaagacgatgctgattttgccagattg
gtgaaagggagaattgagaaaacacttctcggagagatttctgagtatattgaagaggtt
ttccttcccgacgactgttttatcctggttaaattatcactggagaggatacggctgctg
agactagaggtcaatgcagagactgtgcgttactccatctgcatgtctaagctgcgagtg
aaaccaggagatattgccgttcatggtgaggcagtggtgtgcgtttcccctcgggagaac
aacaaaagctccatgtactatgtgctgcagtcattaaaagaggagcttcccaaggtggtg
gttcaaggaatcccagaggttgcccgagccgtcattcatattgatgaacagagcggcaag
aacaagtacaaactcctggtggagggagacaacctgagggctgtcatggcaacccacgga
gtgaatgggagcaggactacttcaaacaacacatacgaggttgagaagactctgggcatc
gaagcggccaggtccacaatcatcaatgagattcagtacaccatggtgaaccatggaatg
agtatcgaccgacgtcatgtcatgcttctggcagatctcatgtcctacaagggggagatt
ctgggaatcaccaggttcggtttggccaaaatgaaggagagcgtgctcatgttggcgtcc
tttgagaaaacggccgatcacctttttgacgcagcctactttggacagaaagactcagtc
tgcggtgtgtccgagtgcatcatcatgggaatccccatgaatataggaacaggactattt
aaactactacacaaggccgacaaagatcctgtgcctgttcaaagacccctcctctttgac
aacgcagacttccacatccctctgctcacgtag
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