Cynoglossus semilaevis (tongue sole): 103388279
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Entry
103388279 CDS
T04866
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem00310
Lysine degradation
csem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103388279 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103388279 (setdb1)
Enzymes [BR:
csem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
103388279 (setdb1)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103388279 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103388279 (setdb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
103388279
NCBI-ProteinID:
XP_008321416
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All DBs
Position
13:5246886..5255995
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AA seq
1222 aa
AA seq
DB search
MESSDGMDVDGWDSSLEEELGVSLDDLRKCIEEAVEQSEIVKKKKAQLTELKKWVEQKEK
EEALTEGLLKDASQSILECEMLVKATFRRNGLVYGESSSEDEGGGGGMLPSSEVIEIEDD
DEDDDVIAVGCLVPPTKPLTPVKDSMLTEASAAIQKTSHQVQKLAQMVKPTAGVSILRST
GPPGAAGSAPAVFVSQVASGSLTQPKANVEEDEVRIGMNILGKKRTKTWHRGVLVAITPV
ANDTFKYKVKFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYAGIVAEM
PNNKNRMRFLIFFDDGYASYVTLPELFPVCRPMKRTWEDIEDASCRDFIEEYITAYPSRP
MVLLKVNQIIKTEWEGTWWKSKVEDVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMT
TANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGLVGASPVKTTQITVSPSPPTVQPRP
LLAQPPQIQPSPQPRMDTKHQMAKKSTSPFVPGVGGTHASKVMQSLSSTSSNLPGPAAVT
IHRGRTLNPPTITYQRQQSTPAPVHPVMTRAVSTVPQQAPYRAPTDRIFYMVHTCQPACL
NRVRPSKSDVHRGKNPLLTPLLYDFRRMIGRRKVNRKMFFHVIYKAPCGLCLRNMPEIQN
YLFLTQCDFIFLEMFCLDPYVLVDRRFQPQKPCYYIPDITDGKEDIPLSCVNEIDSTPPP
DVAYSKERIPEDGVFINTSSDFLVGCDCTDGCLDKSKCSCHQLTLQATGCTPGGQINPNA
GYLYKRLEECLPTGIYECNKRCKCCAEMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDV
AKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSG
VDMSRMKVKPGVSSSQSGAQHTAQSQSSSDSNDADDKDSKSEEESDSSDDTFVKDNFYTP
SSVWRSYTTRGQAKGNKEGSQDSKDGLGGAAKETSEQKPPSMPEETGKSKVASWLTSQGL
KKDSGDSKSQVKSETGKKQDVMTLSDSDDVQTISSGSDDNKEKEKIIPGLTKKQVAVKST
RGIALKTSHGMMVKSGTPGGSGGQGGQGSKTGQQGQTAGGGENISKNTRLFFDGEESCYI
IDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEV
GSVEGKVLLCCCGSTECRGRLL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagcgacgggatggacgtggacggctgggactccagtctggaggaagaatta
ggtgtttctctggacgacctcaggaagtgcattgaagaggccgtggagcagagtgagatc
gtgaagaagaaaaaggctcagctgacggagctgaagaaatgggtggagcagaaggagaag
gaagaggctttgactgaaggactcctcaaggacgccagccagtccattcttgaatgtgag
atgctggtgaaggccaccttccgtaggaatggtcttgtttacggggagagcagctccgag
gatgagggaggtggaggagggatgctgccctcttctgaggtcatagaaatagaggacgat
gatgaggatgacgatgtcattgccgttggctgtttggttcctcccacgaagcccctgact
cctgtgaaagattcaatgctaacagaagcatctgcagcgatacagaaaaccagtcatcag
gtgcagaagttggctcagatggtcaagccaacagcaggggtctctattctccggtctaca
ggaccaccaggtgctgcgggttcagcgccagcagtgtttgtgtcacaggttgcctctggg
tccttgacccagcccaaggcaaacgtagaagaggacgaggtccgaatcgggatgaacatt
ttgggaaagaaacgcacaaagacgtggcaccgaggcgtcctggtcgctatcacccccgtc
gcgaacgacacattcaaatacaaagtgaagttcgataaaggaaagagtttgctgtcagga
aaccatgtggcctttgattacaaccccaccctggagagtctgtatgttggtgcacgtgtg
gtcgccaagtacaaggacggcaacctggtgtggttgtacgcaggaatagtcgcagagatg
cccaacaataaaaaccgtatgaggttcctcatattttttgacgatggctacgcttcttat
gtaacactacctgagctcttccccgtctgtcgaccgatgaaacgtacctgggaggacata
gaggacgcgtcgtgtcgagacttcatagaggagtacatcactgcgtatcccagcaggccc
atggtgctgctgaaggtcaaccagatcatcaagacagaatgggagggcacctggtggaag
agcaaagtggaggacgttgacggcagcttggtgaagattctcttcctggatgataaaagg
agtgagtggatctacagagggtccaccaggttggagcccatgttcaatctgaagatgacc
acagccaacacccaggagaagaagctggccggccagcagaggacacgaccaaatatgggc
gcgttgaggagcaaaggtccagttgtgcagtacaccagtgatggactagtgggagcctct
cctgtcaaaaccacacagatcaccgtgtctccgtccccaccgactgtacagccccgtcct
ctgctagcacaacccccgcaaattcaaccaagcccccagccacgcatggacaccaaacat
cagatggcaaagaagagcacctcaccatttgtccccggggtggggggcacacatgcttct
aaagtcatgcagtctctttcgtccacttcctccaacctccctggacctgctgctgtaaca
atccacagaggaagaacgctgaatcctccgactatcacctaccagagacagcagtccaca
ccagcacctgtccaccccgttatgacccgcgccgtgtccaccgtcccacaacaggccccc
taccgcgcccctacagaccgcatcttctacatggtgcacacgtgtcagcccgcctgtctc
aaccgcgtccgaccctccaaatcagacgttcacagagggaagaaccccctcctcacaccg
ttactctacgacttcagacggatgataggaagacgcaaagtcaaccgcaagatgttcttc
catgtgatctacaaggccccgtgtggactctgtcttcgtaacatgccagagatccagaac
tacctcttcctgacacagtgtgactttatattcttggagatgttctgtttggacccctat
gttctcgtggaccgccgcttccagcctcagaagccgtgctattacattccagacatcact
gatggaaaagaggacatccccctttcctgcgtcaatgagattgattccactccaccgcct
gacgtagcctacagtaaagaacgtattcctgaagatggagtgtttatcaacaccagctcc
gacttcctggttggatgtgattgtaccgacggatgtctagacaaatccaagtgctcctgt
catcagctgacgctgcaggccacaggttgtactccaggtggtcagatcaaccccaacgct
ggatatttgtacaaacgattagaggagtgcctgcccacgggcatctacgaatgtaacaaa
cgctgcaaatgctgtgctgagatgtgcacaaaccgcctcgttcagcacggcctgcaggtg
cgtctccagcttttcaagacccagaataaaggctggggcattcgctgtctggacgatgtc
gccaagggttcttttgtctgcatctacgctggtaaaatcctgacggatgactttgcagat
aaagagggtctggaaatgggtgatgagtacttcgcaaatctagatcacattgaaagtgta
gagaactttaaggagggctacgagagcgaggctcactgttcagacagcgagggcagcggt
gtggacatgtccaggatgaaggtcaaacccggtgtgtcgtcatctcagtcgggtgcccag
cacacagcccaaagccagagctcctcggacagcaacgacgcggacgacaaggactcgaag
agtgaagaggagagtgacagttcagacgacacgtttgtcaaagacaacttctacaccccc
agctctgtgtggaggagctacaccacacggggtcaggccaagggcaacaaagaagggagt
caggacagtaaagacggacttggtggtgcggccaaggaaacaagtgaacagaaaccaccg
tcgatgccagaggagacgggaaaaagtaaagtagcttcatggctgacgagtcaggggcta
aagaaggactcaggagacagcaagagtcaagtaaagtcagaaacaggaaaaaagcaggat
gtgatgacgctgtctgacagtgacgacgttcagaccatcagctctggatctgatgacaac
aaagagaaagaaaaaatcataccaggtttgaccaagaagcaggtggcagttaaatcgact
cgcggcattgctctgaagaccagccatggtatgatggtaaaatcaggaacaccaggagga
agtggaggtcaggggggtcagggaagcaaaacaggacaacaaggccagaccgcaggaggc
ggagaaaacatttccaaaaacaccagactgttctttgacggcgaggagtcctgctacatc
attgatgccaagttggaaggaaatcttgggcgatacctcaaccacagctgtagtcccaac
ctcttcgtccagaatgtctttgtggatacgcacgatttacgattcccctgggtggctttc
tttgccagcaagcggatcagggccggcacagaattgacctgggactacaactatgaggtg
ggcagcgtggagggtaaagtcctgttgtgctgctgtggatccacagagtgcagaggacga
ctgctgtga
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integrated database retrieval system
