Cynoglossus semilaevis (tongue sole): 103393394
Help
Entry
103393394 CDS
T04866
Symbol
grin2b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04020
Calcium signaling pathway
csem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103393394 (grin2b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103393394 (grin2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103393394 (grin2b)
Ion channels [BR:
csem04040
]
Ligand-gated channels
Glutamate (ionotropic)
103393394 (grin2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
103393394
NCBI-ProteinID:
XP_008328573
LinkDB
All DBs
Position
17:12651406..12742517
Genome browser
AA seq
1640 aa
AA seq
DB search
MRLWLAKHKVLLSHSSIMPVCGCRGTCPPHGHALASPSTRSIATEQQRALPPPPHPPLLP
ALHRCTGTSLCLLLLLICLLHLPPACHSRREKGGVGVGAHYIPIPQPPPHHLALPNLLRG
LSIAVVLVGNSSEVALAGAREKEDFLHMAPNVEVLTMNETDPKSIIKSICDLMTEHWLQG
VVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFGPSIEQQASV
ILNIMEEYDWYIFSIVTTYYPGYQDFVTKGSGFTWIVPSLVAGDTVVVPAEYPTGLLSVS
YDEWDYNLEARVRDGVAIITMATSTMMLDRGPHTLLKSECHGAPEKKTPISGNPNEVLRY
LMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSLSMKYHVWPRYELYG
GAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKTGNQTKESGIYIKRC
CKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTIN
EERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAMAVFV
FEYFSPVGYNRCLADGRDPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA
FFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPFRFGTVPNGSTERNIR
NNYVEMHSYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYI
FATTGYGIAIQKESGWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSSQLDVD
NMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFIFSISRGIYSCIHGVQ
IEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDIS
EHRRSLAGHSDCKPPYLPDDNMFSDYISEVERTFGNLHMKDSNLYQDHYLHHHGSTLGLS
GPPPNRPLSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRNMSKFDLLSGQTPPS
GQGFTAGLPDIYGKFSFKGGASSSTYIPGHSYCPGRGEEDGNIRSDVSDISTHTVTYGNL
EGNAKKRKKYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHNHRSASPPLLPLE
RKRGASGNADDNSYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPGNREGGVAACTS
LVPVDDFLKSKPKKSDSKSAGGSGLAGGEWECRNCRASGGGGKQMSMHGGGGGYGGGMSC
GSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQLGGSQGGGGGGGAGPQSQS
XXXXXXXXXXXXDAFVDLQKEESGGMGSLMGGVGGGMSGVGLGGMLPPPRSVSLKEKERY
MEGTSPFAHIFDRHGGSERERERDRDPLFYGGESRKGPGSPFGLFRGGDGLHRRSVGERD
VRDRDRSLMEGGGGAAFSLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYYMKKQQQQQQ
QQQVAKNSRSDFRGQMSTTSYLPASATAGVVSNVTPRFPKELSHGGMNHHGSMLGVGPPR
PFNGSNGHVYEKLSSIESDV
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgagactttggctggcaaaacacaaggttttactctcccactcctccatcatgcctgtc
tgcggctgccgcggcacctgtccacctcacggccacgccctcgcctccccgtccacccgc
tcgatcgccacggagcagcagagggcgctcccaccgcccccgcacccgcctctgctgccc
gctctccaccgctgcaccggcacctccctctgcctcctcctcctgctcatctgcctcctc
cacctgcccccagcctgccactcgcgccgagagaagggcggagtcggagtgggcgctcac
tacatccccatcccgcagcctccaccgcaccacctggctctgcccaacctgctgcgcggc
ctcagcatcgccgtcgttctggtgggtaactccagcgaggtggcgctggcgggggccagg
gagaaggaggacttcctccacatggcccccaacgtggaggtgctgacgatgaacgagacg
gaccccaagagcatcatcaagagcatctgtgacctcatgaccgagcactggctgcagggc
gtggtgttcggagacgacaccgaccaggaggccatcgcccagatcctggacttcatctcg
gcccagacacacatccccatcctgggagtccgtggaggctcctccatgatcatggccgca
aaggacgacaactccatgttctttcagttcggcccgtccatcgaacagcaggcgtccgtc
atcctgaacatcatggaggagtacgactggtacatcttctccatcgtcaccacctactac
ccgggttaccaggactttgtcaccaagggttccggcttcacgtggatcgtcccctcgttg
gtggccggggacaccgtcgtggttcctgcggagtaccccacaggtctgctctccgtgtcc
tacgacgagtgggactacaacctggaggcccgcgttcgtgacggcgtggcgataatcacc
atggcaacgtccaccatgatgttggaccgcggacctcacaccctgctgaagtcggaatgt
cacggagcccccgaaaagaagaccccaatctcaggcaaccccaacgaagtgctcaggtac
ctgatgaatgtgacctttgagggacgtaacctgtcgttcagtgaagacggataccagatg
cacccgaagctggtcatcattctgctcaacaaggagcggcagtgggacagggtgggtaag
tgggagaacggctctctgtccatgaagtaccatgtgtggcctcgctacgagctgtacgga
ggagcagcgaccagggaggatgaccacctgtccatcgtgacgttggaggaagctccgttc
gtcatcgtggaagacgttgatcctctcagcgggacctgcatgaggaacacggtgccgtgc
cggaagcagatcaagacagggaaccagaccaaggagtcgggcatttacatcaaacgctgc
tgtaagggtttctgcatcgacatcctgaagaagatcgccaagtcggtcaagttcacctac
gacctttacctggtcaccaacggcaaacacgggaagaagatcaacggaacgtggaacggc
atggtcggagaggtggtgttaaaaaatgcccacatggccgtgggctctctgaccatcaac
gaggagaggtcagaggtcatcgacttttccgtccccttcattgaaacaggcatcagtgtc
atggtctcgcggagcaacgggacggtttccccctcggcgttcctagaacccttcagtgcc
gacgtgtgggtgatgatgtttgtgatgctgctgctggtctcagcaatggccgtgtttgtg
ttcgagtacttcagccccgtgggctacaaccgctgtctggccgacggcagagacccccac
ggtccgtccttcaccatcggtaaggccatctggctgctgtggggtctggtcttcaacaac
tccgtgccggtgcagaaccctaaaggcaccaccagtaagatcatggtgtcggtgtgggcc
ttcttcgccgtcatcttcctggcctcctacactgccaacctggccgcgttcatgatccag
gaggagtacgtggaccaggtgaccggcctctcggacaagaagttccagagccccaacgac
ttttcgccgccgttccgattcggcacggtccccaacggcagcacggagcggaacatcagg
aacaactacgtggagatgcactcgtacatgaccaagttccaccagaggaacgtcaacgag
gccctgcagagtctgaaggccggtaaactggatgcgttcatttatgacgcggccgtgctc
aactacatggccggcagagacgagggctgtaaactggtgaccatcggcagcggctacatc
ttcgccaccactggttacggcatcgccatccagaaggagtctggctggaagagacacgtg
gacctggccatcctgcagctgtttggagacggtgagatggaggagctggagtcgctgtgg
ctgacgggcatctgtcaccacgagaagaacgaggtcatgtccagtcagctggacgtggac
aacatggccggcgtcttctacatgctgggcgccgccatggctctgtcgctcatcaccttc
atctgcgaacactggttctactggcagctgcgcttctgcttcatgggcgtctgctcgggg
cagcccggcttcatcttcagcatcagcaggggaatctacagctgcatccacggggtgcag
atcgaggagaagagcagttcggccctgaactccccgtcagccaccatgaacaacactcac
tccaacatcatgcgtctgttacgcaccgccaagaacatggcctccctgtccggggtcaac
gggtcaccgcacagcgccctggacttcatccgtcgcgagtcctccgtgtacgacatctcc
gaacaccggcgcagcctggcgggtcactcggactgcaagcctccgtacctgccggacgac
aacatgttcagtgactacatcagcgaggtggagaggacatttggaaacctccacatgaag
gacagcaacctttaccaggaccattacctgcatcaccacggctccacactagggctcagc
ggaccgccgcccaaccggccgctcagtttgggaagcgctagttcactggagggcggcatg
tttgactgcgacagtctgggcggtggcgtggcgcccatcttcaccacgcagccctgctcc
gcactgacccacaggaacatgagcaagtttgacctgctgtcgggtcagactccgccctcg
ggccagggcttcaccgcgggcctgccggacatatacgggaagttttcctttaaaggaggg
gcctccagctccacctacatccctggacacagttactgtccaggcagaggagaggaggat
ggaaacatacgctcggacgtttccgacatttccacgcacactgtaacatacggaaacctg
gaaggaaacgccaaaaagcgcaagaagtaccgcgacagtctgaagaaacggccggcctcc
gccaagtccagacgggagctggacgagatcgagctgggctacaggagaaagccctaccac
atcagccaccaccattaccacaaccaccgctctgcctctccgccacttctgcccctagaa
cgcaaaagaggagcgagcggaaacgccgatgacaactcctatctcttcagagagaaggag
agcgtcagggatttctatttggaccagtttcggcccaaagagggcgtccctcagtgggaa
cacgtggatctaaccgagggccccgggaaccgagagggaggtgtcgccgcctgcacctcc
ctggtcccggtggatgactttcttaagagcaaacccaaaaagtctgactcgaagagcgcc
ggaggatctggtttggcaggaggagagtgggagtgcaggaactgtcgggcgagtggtggg
gggggcaagcagatgtccatgcatgggggaggtggtgggtacggtggtggtatgagctgc
ggctcctcgggaggcggaggaaacagccggcccagctccgcgacctgcatgcgctgtgaa
ggctgtaaaaagacaggaaacctctatgacatcagcgaggacaacaaccacctcttggaa
cagctggggggaagccaaggtgggggcgggggtgggggtgcaggccctcagtctcaatcn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgacgcgtttgtggaccttcaaaag
gaagagtcgggtggaatggggagtttgatgggaggcgtgggtggagggatgagcggggtg
ggcctgggagggatgctgcctccacccaggagtgttagcttgaaggagaaggaacgctac
atggagggaactagtccctttgcacacatatttgatcgtcacgggggctcggagagggaa
cgggagcgagacagggatccgttgttttacggaggcgagagccgcaaaggccccggctca
cccttcggtctgttcaggggcggagacggccttcaccgacgctcggttggagagcgagac
gtgagagacagagacaggtctttgatggaaggtggaggtggggcggcgttttctttatcc
aaatctctttaccccgacagggtaaaccaaaacccctttattcccaccttcggcgacgac
cagtgtctgatgcacggagccaaacagtattacatgaaaaagcaacagcagcagcagcag
cagcaacaagttgccaaaaacagccgaagtgacttcaggggccagatgagcaccacgtca
tatctgccagcatctgccacggccggcgtggtctccaacgtcaccccccggttcccaaaa
gagctcagccacggtggcatgaaccaccacggctccatgctgggggtcggacccccgcgc
cccttcaacggaagcaatggccatgtgtacgagaaactctccagcattgagtccgacgtg
tga
DBGET
integrated database retrieval system
