Cynoglossus semilaevis (tongue sole): 103397970
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Entry
103397970 CDS
T04866
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04020
Calcium signaling pathway
csem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103397970
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103397970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103397970
Ion channels [BR:
csem04040
]
Ligand-gated channels
Glutamate (ionotropic)
103397970
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Toprim_2
Motif
Other DBs
NCBI-GeneID:
103397970
NCBI-ProteinID:
XP_008334652
UniProt:
A0A3P8VLW4
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Position
Z:13799208..13828031
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AA seq
905 aa
AA seq
DB search
MELRSMLLLTVLQCCSVARGGWGAPAGGNGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEEKETKTKIRNYESIDPQNFDFRRTPKAEKVLMFNQDTNLTALLLEAKDLEARVII
LSASEDEAAAMYKAARQLNMTGSGYVWLVGEREMNGKALSEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYADGLTGRIEF
NDDGDRRFATYSIMNYQQKSGRVLQVGVFNGSQVIMNPQRKIIWPGGETEKPIGYQMSTK
LKIVTIHQEPFVYVKPTRSDGTCKEEYSVNGVLIKKVICTGPNGTIPGQPTVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtagcatgctgctgctcactgtactacagtgctgctcggtggctcgcggc
gggtggggggccccggcggggggaaacggcgccgtcctgagtcaaaaacgttacgagcag
gtgttcaaggaagcggtgagccaggccaacgctctgtacgggaaggacaagttcaagatg
aacgccatctctgttacacacaagcccaacgccatccaaatggccctgtctgtgtgcgag
gacctcatttccaaccaggtgtacgccatcctggtgagtcacccgcctcagtccaatgat
cacctgactccgacgcccgtttcctacaccgccgggttctacaggattcccgtggtcggc
ctgacgacaagaatgtcgatttattctgacaagagcatccacctgtcattcctgaggacc
gttcctccgtactcccaccaggccaacgtctggttcgacctgatgagggagttcaggtgg
aaccacatcatcctgatcgtgagcgacgatcacgagggccgcgccgctcaaaagagactg
gagacgctgttggaagagaaagagaccaagactaaaatcaggaactatgaaagcatcgac
ccacagaactttgacttcaggagaacacctaaggcagaaaaggtgctgatgttcaaccag
gacaccaacctgacggcgctgctactcgaggccaaggacctggaggctcgagtcatcatc
ctctctgccagtgaggatgaagccgcggccatgtacaaagcggcccgtcagctcaacatg
accggctccggttatgtgtggctggtcggagaaagagagatgaatggaaaagctctgagt
gaagctccagatggactgctgggcctccagctaatcaacggtaagaatgagtcggctcac
atcgctgacgctgtggccgtcgtcgctcagtctctgcaggagttatttgagaaagagaac
atcacagagccgcccaggggttgtgtgggtaacaccaacatctggaggaccggaccgctc
tttaaacgggtcctcatgtcctctaagtacgccgacggtttgacgggacgaatcgagttc
aacgacgacggagaccggcgtttcgccacctacagtatcatgaactaccagcagaagtcc
ggtcgagttcttcaggtcggagtcttcaacggatcgcaggtcataatgaaccctcagagg
aagatcatctggcctggaggagagaccgagaaaccaatcggataccagatgtcgactaag
ctaaagattgtgacaattcatcaggagccgttcgtctacgtgaagccaaccaggagtgac
gggacatgtaaagaagagtacagtgtgaatggagtcttgatcaagaaggtgatttgtacc
ggacccaacggtactataccaggtcagcccactgttcctcagtgttgctacggtttttgc
atcgacttgctcatcaagttggcgatgagcatgaacttcacctacgaggtccacctggtg
gcagatggaaaatttggcacgcaggagcgagtcaacaacagcaacaagaaagagtggaac
gggatgatgggggagctgctgggaggtctcgccgacatgatcgtggctcctctcaccatc
aacaacgagcgtgctcagtacatagagttctccaaacccttcaaataccaggggcttacc
atcctggtcaaaaaggaaatcccacgcagcactctggactcattcatgcagccgttccag
agtacactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctctaccta
ttagaccgattcagcccgtttggaaggtttaaagtcaatagcgaagaagaagaagaagac
gccctcaccctttcgtcagccatgtggttctcatggggagtactgctgaactccggtata
ggagaaggagctcctcggagtttctcggcgaggattttaggtatggtgtgggcaggattt
gccatgataatcgtagcatcgtatactgccaacctggcagccttcctggtgctggatcgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcggaatccgtcagataaattc
atctacgccacagtgaagcagagctcggtggatatttacttcaggcggcaggtggagctg
agcaccatgtacaggcacatggagaagcacaactacgagagcgccgccgaggccatccaa
gccgtcagagacaacaagctccacgcattcatctgggacagcgccgtgttagagttcgag
gcctcgcagaagtgtgacctggtgacaacgggagagcttttcttccgctcgggattcggc
attggaatgagaaaagacagtccgtggaaacagaatgtttccctggctattcttagttcc
cacgagaatggcttcatggaggatttggacaagacgtgggttcgataccaggagtgtgac
tcgcgaagcaacgctcccgccacactgacctttgagaacatggcaggtgtcttcatgttg
gtggctggtggcatcgtcgccgggatcttcctcatcttcatcgagatcgcctacaaacgt
cacaaagacgctcgcaggaaacagatgcagctcgccttcgccgccgtcaacgtgtggagg
aagaaccttcagccgtacccgaccgacatcaccggccagctcaacctatcggatccgtcc
gtcagcaccgtggtctga
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