Cynoglossus semilaevis (tongue sole): 103398103
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Entry
103398103 CDS
T04866
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103398103 (hnf1a)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103398103 (hnf1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103398103
NCBI-ProteinID:
XP_008334834
UniProt:
A0A3P8VSE4
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Position
Z:14956354..14962194
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AA seq
548 aa
AA seq
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MEREDEGRPGALTPLQQQLIWALLESGLSRDILVQAMGELEQERAGAGARKAERGDGESS
EEGEMDFQPPIFRELEQLSPEDVAKMRVEVERLLQEDPWHVAKKVKTYMQQHNLPQREVV
ESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKRCEISQQFTNAKHGLASLEEQDRKG
RRNRFKWGPASLQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPCQLAGLGSNLV
TEVRVYNWFANRRKEEAFRQKLALDTPFGNQSASSVNLNLQSSPEHGVKYNQQILCDTIA
SAKGGAGRHVISPVQLEPSHTLLETHNPKQLSSGGPLPPVSTLTSLHNLSCSTASSQGLI
MASLPSVMSLGESSLLIGLASTQPQTVINNVGASFTTLQPISFQQQLHGSPQQPITQQLQ
SHMGANPFMATMTQLPCHMYAKSDSPQYHPSSLLSQAMVITDSSSLGTLTSLTAVRQILT
SDPEEQTDQSLPEDSLHLQPQTPVPASSESLELYPSSQASDSHQSHLLSPSPADISSYIP
AQLVSTAQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaggacgagggccggcccggtgctctgacccccctgcagcagcagctgatc
tgggctctgctcgagtccggcctgtcccgggacatcctggtccaagccatgggggagctg
gagcaggagagagccggcgctggggcgaggaaggccgaacgcggggacggggagagttcg
gaggaaggagaaatggacttccagccgcccatcttcagggagttggagcagctgtccccg
gaggacgtggccaagatgagggtcgaggtggagcgcctgctgcaagaggatccctggcac
gtggcgaaaaaggtgaaaacctacatgcagcagcacaacctcccccagagagaggtggtg
gagtccacgggtctgaaccagtcccacctctcgcagcacctcaacaaaggcacgcccatg
aaaaaccagaagagagctgccctgtacagctggtatgtcaagaagcggtgcgagatcagc
cagcaattcaccaatgccaaacacggcctggcatcgcttgaagaacaggacagaaaagga
cggaggaaccgattcaagtggggtccggcgtcgctgcagatcctgttccaggcctacgaa
cgacagaagaatcccagcaaagaggagagagaagggctggtggaagaatgtaacagggca
gagtgtctccagaggggagtgtccccctgtcagctagccggactgggctccaacctggtg
accgaagtccgggtctacaactggttcgccaaccgcaggaaagaggaggcctttcgtcag
aagctggccctcgacacacccttcggcaaccaatcagcttcatccgtcaacctcaacctt
cagtccagccccgagcacggtgtcaaatacaaccagcagatcctgtgtgacaccatcgct
tctgccaagggtggtgctggacgtcacgtgatcagtccagttcagctggagcccagccac
acactcctggagacccacaacccgaagcagctgtccagtggcggtccactgccccccgta
agcactctgacctccctacacaacctgtcctgctccaccgcgtcctcacaggggctcatc
atggcgtccctgcccagtgtaatgagtctgggggagtcttcgctgctgattggtctggcc
tccacgcagccacagacggtcataaacaacgtaggggccagcttcaccacgcttcagccg
atctcgtttcagcagcaacttcacgggtctccgcagcagccaatcacgcagcaacttcag
agtcacatgggagccaatcccttcatggccaccatgacgcagctgccgtgtcacatgtac
gccaagtcggactcgccccagtaccatccgtccagtctgctgtcccaggccatggtcatc
acagacagcagcagcctggggacgctgaccagcctcactgccgtcagacagattttaaca
tcggacccggaagagcagacggaccagagtttaccggaagattctttgcatctgcagcca
cagacgcctgttccagcctcgtcggagagtctggagctctatccttcctctcaggcctca
gacagccaccagtctcacctcctgtcgccctcaccggccgacatcagctcctacatccct
gcgcagctggtctccactgcccagtag
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