Coccinella septempunctata (seven-spotted ladybird): 123306267
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Entry
123306267 CDS
T07873
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03020
RNA polymerase
cset03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123306267
09124 Replication and repair
03420 Nucleotide excision repair
123306267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123306267
03400 DNA repair and recombination proteins [BR:
cset03400
]
123306267
Enzymes [BR:
cset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123306267
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123306267
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123306267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
123306267
NCBI-ProteinID:
XP_044744103
LinkDB
All DBs
Position
2:40164546..40173487
Genome browser
AA seq
1908 aa
AA seq
DB search
MSNDTNDSKAPHRLVKRVQFSILSPDEIRRMSVTEGGIRFPETMEAGRPKLGGLMDPRQG
VIDRMSRCQTCAGNQTQCPGHFGHIDLAKPVFHVGFLTKTIKILRCVCFYCSKLLVSPNN
PKIKEVVMKSKGQPRKRLAFVYDLCKGKNICDGGDEMDVGKEGDEQNPNKKQGHGGCGRY
QPMIRRQGLDLTVEWKHGNEDSQEKKQPLTAERAWEILKHITDEECFILGMDPKFARPDW
MIVTCLPVPPLSVRPAVVMHGSARNQDDLTHKLADIIKANNELMKNEAAGTAAHVISENI
KMLQFHVATFVDNDMPGMPRAMQKSGKPLKAVKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPELVTPFNFEQMQELVHRGNSQYPGAKYIIRDNGERI
DLRFHPKSSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENLHITPRQIITPQCNKPVMGIVQDTLCAVRK
MTKRDVFIELDQMMNILMFLPIWDGKMPKPAILKPKPLWTGKQIFSLIIPGNVNMIRTHS
THPDDEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGASAGSLLHICMLELGHQVCGR
FYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQNLP
TIKLSNRAFEKKYRFDPSNERYLRRVFNEDVIKQLMGSGEVIAELELEWEQLQKDREALR
QIFPNGDSNVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLKVIQGVRKLLQKCVIVAGED
RLSVQANENATLLFQCLVRSTLCTKCVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDG
KFGEAADEEVDKMDDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDAKKRIVITETG
EFKAIAEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHA
EVDPMRGVSENIILGQLPRMGTGCFDLLLDAEKCKYGIPIPQAQGGDVLASSMFFDSAAT
PSMSPGVAMTPWNQGATPYSGSNWSPHNLMGSGMTPGGPSFSPSAASDASGMSPGYGSWS
PSGGQSPAMSPYLTSPRGQSPSYSPSSPAYQPMSPSLTVASPGYSPNSYSPTSPNYSPTS
PNYSPTSPNYSPTSPSSYSPSSPSYSPTSPSYSPTSPNFSAASPSYSPTSPSYSPTSPSY
SPTSPSYSPTSQNYSPTSPRYSPTTPNYSPASPSYSPTSPSYSATSPSYSGTSPTYSPTS
PNYSPTSPSYSPSSPRYTPASQNYSPSSPNYSPASPNYSITSSKYSPSSPNYSPTSPSFS
GESHQYSPTSPNYSPTSRGYSPSSPQHTPTASSRYSPSSPSYSPSSPGYSPTSPQYSPHS
TKYSPTSPTYTPTSPSYSPASPSFSPQPPRYSPSSPNYSPTSPGQDND
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgatactaacgatagtaaagctccacatagattggttaaaagagtgcagttt
agtatattaagtccagatgaaatccgtcgtatgtcagttacagaagggggcatccgcttc
cccgaaacaatggaagcgggtcgccctaaactggggggacttatggatccccgacagggt
gttatagataggatgtccagatgtcaaacttgtgctgggaatcagactcagtgtcccggt
cactttgggcatatagatttggcaaaacctgtttttcatgttggatttctcacaaaaacg
attaaaatcttaagatgtgtttgtttttattgcagtaaattattagtcagtccaaataat
ccaaaaatcaaagaagttgttatgaaatcaaagggacaacctagaaagagattagctttt
gtttatgacctttgtaagggtaaaaatatttgtgatggaggtgatgaaatggatgttggc
aaagaaggagatgagcagaatccaaataagaaacaaggtcatggtgggtgtggtagatat
caacctatgatcagaagacaagggcttgatctcactgtcgaatggaaacacggcaatgaa
gattcccaagaaaaaaagcaaccactaacagctgagagggcatgggaaatattgaaacat
attacagatgaagaatgtttcatactgggaatggatcctaaatttgcgcgtccagattgg
atgatagttacttgcttacctgtaccgcctctttcagtgagacctgctgttgttatgcat
ggttctgcaagaaatcaagatgacttgacgcataaactggccgatattatcaaggcaaac
aacgaacttatgaagaatgaagctgctggtacagctgctcatgttatcagtgaaaacata
aaaatgcttcagtttcatgttgccacgtttgtagataatgacatgcctggaatgccaagg
gctatgcaaaagtcaggtaaacccctaaaggcagtaaaggcaagattaaagggaaaagaa
ggcagaattagaggtaatcttatgggtaagcgagtggacttctccgccagaactgttatc
accccagatccaaacttgagaatcgaccaagtaggtgtgcccagaagtatagcacaaaat
ttaacgtttccagaacttgtgacacccttcaactttgaacaaatgcaggagcttgtccat
aggggtaactctcaataccctggcgctaaatatattataagagataatggcgagagaata
gatcttagattccacccaaaatcttcagatctccatttgcagtgtggctataaagtcgaa
agacatattcgtgacggtgacttggtcattttcaatcgtcagcccacccttcacaagatg
agtatgatgggtcacagggtcaaagtcttaccctggtccacgtttcgaatgaacctgtcc
tgtacctcgccctacaatgccgatttcgacggcgatgaaatgaacctgcacgtgccgcaa
agtatggaaacaagagcagaagttgagaatttgcatattacgcccagacagatcatcaca
cctcagtgtaacaaacctgtcatgggtattgtgcaagataccttatgtgccgtcagaaaa
atgacaaaaagggacgttttcatcgaactagatcagatgatgaacatcctcatgttttta
cctatttgggatggtaaaatgccaaaaccggccattctgaaacctaaaccgctatggacc
ggtaaacaaattttctccctcatcattcccggcaatgtcaacatgatacgaacacattcc
actcaccccgatgacgaggacgatggtccctataagtggatttcacccggagataccaaa
gtaatggtagagcacggggaattaatcatgggtatcttatgtaagaaaactctgggagct
tccgctggttcactgttgcacatctgtatgttggaattggggcatcaggtgtgcggaaga
ttttacggtaacatccagacagtggtcaacaattggctgcttttggaaggtcacagtatc
ggtatcggtgacacaattgccgatcctcaaacctatttggaaatccagaaggcaattaaa
aaagccaaagaggatgtcatagaagtcattcaaaaggctcacaatatggagttggagccc
actccgggtaacacgctgaggcaaactttcgaaaatcaggtgaacagaatcctgaacgac
gctcgtgataaaactggaggttcagccaagaaatctctgacagaatacaacaacttgaag
gctatggtcgtctcaggttccaaaggttcaaacattaacatttctcaggttatcgcctgt
gtaggacaacaaaacgtagaaggtaaacgtataccctttggcttcaggaaaaggaccctg
ccgcatttcatcaaagacgattacggtccagaatccagaggattcgtcgagaattcgtat
cttgccggtctcacgccgtcagaattctatttccacgccatgggtggtcgtgaaggtctt
atcgatacagccgtaaaaaccgcagaaactggttacatccagagacgtctcatcaaggct
atggagtccgtcatggtgaattacgacggtactgtcagaaattcggttggacagctcatt
cagttacgttatggagaggatggtttatgcggtgagatggtcgagtttcagaatcttcca
actatcaaattgagtaatagggccttcgagaagaaatacaggtttgatccgagtaatgaa
agatacctcaggagggttttcaatgaagacgtcatcaaacagctcatgggatccggagaa
gtaattgcagaactcgaattggaatgggaacaacttcaaaaggatcgagaagcgctaaga
cagattttccccaacggtgattcgaatgtggtattgccatgcaatctccaaagaatgatt
tggaatgtacaaaaaattttccacataaataagagagcaccgacagacttatctccgttg
aaggtgattcaaggagtgagaaaattacttcagaaatgtgttatagtggctggtgaggat
aggctgtcagtacaggctaacgagaatgccacattgttgttccaatgtcttgttaggtcc
actctgtgtacaaaatgcgtatctgaagaattcaggcttagcacagaggccttcgagtgg
cttataggagaaatcgaaactaggttccagcaggcacaggcaaatccgggagagatggtg
ggagctttggcagcccagtctctgggagaacctgccacacagatgaccctaaacactttc
cattttgctggtgtgtcatctaaaaacgtaacgcttggtgtacctcgtctgaaggaaatt
ataaatatatctaaaaaaccgaaagctccttctctaaccgtcttcttaaccggagcggct
gcaagagatgccgaaaaggccaagaatgttctatgtagactggaacataccaccctcaga
aaagtcacagcaaacaccgcgatctactacgatccggatccccaaaatacggtaattccg
gaggatcaagaattcgtgaacgtttactacgaaatgcccgactttgatccgactaggatc
tcaccgtggcttctacgtatagagttggatagaaaaaggatgacggacaagaagttaacc
atggagcaaatcgctgaaaagatcaacgcaggcttcggcgacgatttgaactgtattttc
aacgacgataacgccgaaaagttggtcttgcgtatacgtattatgaatagtgatgatggc
aagttcggagaagcagcagacgaagaggttgataaaatggacgatgatatgtttttgagg
tgtatcgaagccaacatgttgagtgatatgacgttgcaaggtattgaagctatatctaag
gtgtacatgcatcttccacagacagacgcaaagaaaaggatcgtaatcacagaaacggga
gaatttaaggctattgctgaatggttgttagaaactgacggtactagtatgatgaaagta
ttatctgaaagagatgtggatcctgtaagaacttactcgaacgatatttgtgaaatattc
tcagtacttggaatagaagccgtaagaaagtctgtggaaaaagaaatgaacgctgtactt
cagttctatggtctttacgtaaattaccgccatcttgccttactttgcgacgttatgacg
gccaaaggtcatctcatggctattacacgtcacggtatcaatagacaggatacaggagct
ctgatgagatgttccttcgaagaaacagtggacgtgttgatggacgcagcatcacatgcc
gaggtagatccaatgagaggcgtatctgaaaatataattttgggtcagctacccagaatg
ggtactggttgtttcgatctattgctagacgctgagaaatgtaaatatggaataccgatt
ccgcaggctcaaggaggagatgtattggcttcctctatgttctttgattctgccgcaaca
cccagcatgagtcctggtgtggctatgactccatggaatcagggagcaacaccctacagt
ggtagcaattggtcgcctcacaacctcatgggaagtggaatgacacctggaggaccatca
ttctccccatcagctgcatctgatgcttctggcatgtccccgggttatggatcatggtct
ccgtctggtggtcaatcaccagcaatgtctccttatttgacctctcctcgaggccagtcg
ccatcttacagtccttcaagccctgcatatcaacctatgtcaccgtcattaactgtcgct
tcgccagggtattcacctaattcctattcaccaactagtccgaattacagtccaactagt
ccaaattactcgcccacctctccgaattattctccaacatctcccagcagttactcgcct
tcctctcccagttactcaccaacttcaccatcttattcaccaacttctcccaatttttct
gcagcttccccatcatattctccaacatccccatcgtattctccaacgtccccttcatat
tctccgacatccccttcatattctccaacttcacaaaattattccccaacttctccacgt
tactcacccacaactccaaattattccccagcatctccttcctattcccctacttctcct
tcttactccgctacttccccgtcgtactctggtacttcccccacatattctccgacatct
ccaaactattcacctacttcaccaagttattctccctcatcaccaaggtacactcctgct
tcacaaaattattccccttcatctcccaattattcaccagcatccccaaattactccatt
acttcttccaaatattctccttcatcaccaaactattccccaacatcgccgtcattctct
ggtgaaagccatcaatattccccaacttcaccaaattattcaccaacatcccgaggttat
tctccatccagtcctcagcacacacctactgcaagctcacgctattccccttcatctcca
agttactccccaagttcacctggttattccccaacatctccccagtattctcctcatagt
actaagtattcacccacttctccaacctatactcccacatctcctagttactctcctgct
tcaccttcattttctccacaacctcccagatattctccatcatctccaaattattctcca
actagccctgggcaagataatgattaa
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integrated database retrieval system
