Campylobacter subantarcticus LMG 24377: CSUB8523_0268
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Entry
CSUB8523_0268 CDS
T03572
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csf03009
]
CSUB8523_0268
Enzymes [BR:
csf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CSUB8523_0268
Ribosome biogenesis [BR:
csf03009
]
Prokaryotic type
ribosomal protein modification factors
CSUB8523_0268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJC91837
LinkDB
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Position
complement(231260..232576)
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AA seq
438 aa
AA seq
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MPKLFLMSLGCNKNLVDSEIMLGRLSDYEICDEPSIADVLIVNTCGFIDSAKKESINAIL
DLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDYEKIDEMILKKTNLFSNST
YLQDKNTNRVITGSNYHAFIKIAEGCNQKCSFCAIPSFKGKLKSRSLESIINEVKELVKK
GYKDFSFIAQDTSSYLFDQGQKDGLLKLIEAVENIQGVKSARILYLYPTSISKEVIEKII
QSKVFVNYFDMPLQHISDNMLKIMKRGANKAKLIELLNLMKQAPNSFLRTGFIVGHPGES
DEDFEELCTFIKEFGFDRISVFAYSKEEDTAAFDMEQIPNKIINARLKTIEKIVDECIEK
SFNQQVGKKTLAFCEGQSSEGEFFIGAKDLRWDRNIDGEILINESDCGNLEMGELYECEI
TQSLDKKLIAKALRKLDD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaactttttttaatgtctttaggttgtaataaaaatttagttgatagtgaaatc
atgcttggaagattgagtgattatgaaatttgtgatgagccaagtatagccgatgttttg
attgttaacacttgtggctttatcgatagtgcaaaaaaagaaagtataaatgcgatttta
gacctacacgagcaaagaaaaaaagactcattgctagttgtaacaggctgcttaatgcaa
cgctaccgcgaagaattgatgaaagaacttcctgaagttgatctttttaccggtgtggga
gattatgaaaaaattgatgagatgatacttaaaaaaactaatcttttttctaattctact
tacttacaagataaaaatactaatcgcgtgatcacaggctctaactatcacgcctttatc
aaaatagctgaaggctgtaatcaaaaatgttcattttgtgctataccaagctttaaagga
aaactcaagtcaagaagcttagaaagcattataaatgaagtaaaagaacttgttaaaaaa
ggctataaagacttttcttttatcgctcaagatacaagttcatatttgtttgatcaaggt
caaaaagatggacttttaaaactcattgaagccgtagaaaatatccaaggtgtaaaatct
gctagaattttatacctatatccaacaagtattagcaaagaagtgatagaaaagatcatc
caatcaaaagtttttgtaaattattttgacatgcctttgcaacacattagcgacaatatg
cttaaaatcatgaagcgtggagccaataaagctaaattaatcgaacttttaaatttaatg
aagcaagcaccaaattcttttttgcgtacaggttttatcgtgggtcaccccggagaaagc
gatgaggactttgaagaattatgcacctttatcaaagaatttggttttgatagaattagt
gtttttgcatattctaaagaagaagatactgcagcttttgacatggagcaaattccaaat
aaaatcatcaatgcaaggttaaaaactatagaaaaaatcgttgatgagtgcatagaaaaa
agcttcaaccaacaagttggcaaaaaaactttagcattttgtgaaggtcaaagctctgaa
ggagaatttttcatcggtgcaaaagacttgcgttgggatagaaatatagatggagaaatt
ctcattaatgaaagtgattgtggaaatttagaaatgggcgagctttatgagtgtgaaatc
acgcagagcttagacaaaaaactcattgcaaaagccttaagaaagcttgatgattga
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