Camellia sinensis (tea plant): 114283072
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Entry
114283072 CDS
T07364
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114283072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114283072
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114283072
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
114283072
FA (Fanconi anemia) pathway
Downstream FA components
114283072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
HMUDK_hel
Motif
Other DBs
NCBI-GeneID:
114283072
NCBI-ProteinID:
XP_028081704
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MDPVTKPKNVYHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGK
SLSLLCSALAWQQNYRSRALTANPAHLKPAPEASIDPLAYGGGFLPETQPSASGNPEPAP
SATNNNSKKKKTVPTIFYASRTHSQITQVIREYRKTTYRVPMSVLASRKHYCTNRHVHGK
DNINEECKLLLDNQEVGCSEFKNVHKVKGHSSLKKGGCNEVHDIEDLVKVGYDVKGCSYF
AARSMADDALLVFCPYNYIVNPIIRKAMEVDISGAIIILDEAHNIEDIARDGGSVDIDED
ALYKLQTELGQLTFVDSTIYQPLHEMIQDVISWMEQRKDTLEKREFQHYFSCWSGDKALR
ELQEANITRQCFPILQDCATKAIKAASDAEQEVAHLTGMSATTLEGLFSSLNYFFSGNGV
HIYDYQLALQRYVKRDAGNAAAGWTHTLNLWCLNPAVVFREIADLSLSVILTSGTLSPMN
SFSSELGVQFGTSLEAPHVIDVESQLWVAVVPTGPGNYPLNASYKTADKYAFQDALGTSL
EEICKIVPGGSLIFFPSYKLMEKLCNRWRETGQWSRLNARKSLFVEPRGGSQDDFEHVLM
GYYDSIRQRKKPVLGRKRKGKKLGLSNCDTMECAENPTGGAAFLAVCRGKVSEGIDFSDE
NARVVIIVGIPFPNINDIQVAQKKKYNDTYKSSRNLLSGNEWYCHQAFRALNQAAGRCIR
HRFDYGAIILLDERFREERNITYISKWLRKSIRQYDSFDKSLEELKSFFRDIKERVGKED
VNIAQNSDVNVDDISAMNQGKWFTRKKNQKVNKTSKCGSKLVSNSMMSMEKTARLCHSPT
FAPKYDATLIQSESEDCVEVQTLLPDEKNIRSSREYVDLECSFQNNFRCSGALSMAFSPD
DEVSIVKETPSMDASLALTSSGSFPNDEDSSSTIIQVPTEFPDQLLLHSTSPSNSNAGPA
KSYCSLVVTPQKNVNADTESVLNLSVNSHTQKKREPLLRSTLINLTQPGEFDAPAPRSLG
HVSFMASSTTNKDANNRTEFGLETSHPQNEFMMSSSHVMDKRLQILCSLCRNPLGLPENH
LYVSCSITSSSKVQLTTLLKKRSGDPAENTSTSVPVAISDISSVDQRLCNRAYEGAAGQG
IWCREDGCVFNTVFCPFCSNPGNCLGVQVMATDASNVQLLNKILFYLDRLEIKNLEASKE
KDLPPVRGSSVGNCAVPMSIEKFSYIPPQQNSEGWRTTKSRQMRLPKKGLLPTTGD
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatccggtaaccaaacctaagaatgtgtaccacattgggggcatcgcagtggaattc
ccgtaccaaccctacggttctcagttggcattcatgggcagagtcatctccacgctggat
cgagctcaaagggacggtcactgtcacgccttgctcgagtcgccgactggaactggaaaa
tctctctcgcttctttgctcggctctcgcttggcaacagaactaccggtccagggctctc
actgccaatcccgctcacttgaagcctgcgccggaggcctccatcgatcccttagcttat
ggcggtggatttcttcctgaaactcagccttcagcttcaggaaatccagagccagctccg
tctgcaacaaacaacaattctaaaaagaaaaagacagtacctaccattttttatgcctcg
aggacacattcacaaattactcaggtgattcgcgaataccggaaaacaacttaccgggtg
ccaatgtcagtgttggcatcaaggaagcattactgcacaaacaggcatgtacatggcaaa
gacaatatcaatgaagaatgcaagttgcttctagacaaccaagaagtaggatgctcagaa
ttcaaaaatgtgcataaagtcaaaggtcactcatctcttaagaaaggaggttgcaacgaa
gtccatgacattgaagatcttgtgaaagttggatacgacgtgaaaggttgctcatacttt
gctgcacgttctatggcagatgatgcactgttagttttttgcccatacaactacattgtt
aatccaatcatccgcaaagcaatggaagtggatataagtggggccattatcattcttgat
gaggcacataatatagaagacattgctcgtgatggaggtagtgtggatattgatgaagat
gctttgtataaactgcagacagaattagggcaattgacttttgtggattcaacaatttac
caacctttacatgaaatgattcaggacgtaataagttggatggaacagaggaaagatacc
ttggaaaaacgtgaatttcagcattatttctcatgttggagtggtgataaagctttaagg
gagctccaagaagcaaacattacacggcagtgcttccctatattgcaagattgtgccaca
aaggcaattaaagctgcttcagatgcagagcaggaggtagcccatttaactggcatgtca
gctacaacattggaagggttgttctcttcacttaattacttcttctctggaaatggggtc
cacatatatgattatcagcttgcattacaacgatatgttaaaagagatgctgggaatgct
gcagcaggctggactcatactttgaatttgtggtgcctgaatccagctgttgtcttcaga
gaaattgctgatctttctttatcagtgattctcacatctgggaccctatccccaatgaac
tccttctcatctgaactaggggttcagtttggaacttctctggaagctccacacgtgata
gatgttgagtcacagctgtgggtcgctgtagtccctactggtcctggtaattatccgttg
aatgcaagttataagactgctgataaatatgccttccaggatgctctaggcacatctttg
gaggaaatatgcaagattgttcccggtggttctcttattttcttccctagttataagttg
atggagaaactatgcaatcgttggcgtgaaacaggtcaatggtctcgactaaatgctcga
aaatccctttttgttgagccaagaggaggaagccaagatgattttgagcatgttttgatg
ggttattatgattcaattcgtcaaagaaaaaagcctgttcttggaagaaagagaaagggt
aaaaaacttggacttagtaactgtgatacaatggagtgtgcagagaatcctacaggaggc
gctgcttttctggcagtttgccgaggaaaggtttcagaaggaattgatttctctgatgaa
aatgctagagtggttataattgtgggcattccctttccaaacataaatgacattcaagtt
gctcaaaagaagaaatataatgacacatataaatcatctagaaaccttctaagtgggaac
gagtggtactgtcatcaagcctttcgagctctcaaccaagctgcaggccgttgtatacga
cataggtttgattatggagccatcatcttactagatgagcgttttcgtgaagaaaggaac
ataacatacatttcaaagtggctaaggaaatccattagacagtatgacagcttcgataag
tcacttgaggaattaaaatcatttttcagagatataaaggaacgggttggcaaagaggat
gttaatattgcacagaattctgatgttaatgtggacgatatctctgctatgaatcaggga
aaatggttcacaagaaaaaaaaatcagaaagtgaacaaaactagtaagtgtggatcaaaa
ttagtttcaaacagcatgatgtcaatggaaaaaactgccaggttatgccattctccaact
tttgctccaaagtatgatgccacattaatccaatcagaatctgaagactgtgtagaagtt
caaacattgctgccagatgaaaaaaatattcgcagttccagagaatacgttgacctagaa
tgcagtttccagaacaacttcaggtgctctggggctttatcaatggcattttcccctgac
gatgaagtatccattgtcaaggaaacccctagtatggatgccagtctcgctctaactagt
tcaggatccttccccaatgatgaagactctagttcaacaataattcaggtccctaccgag
tttccggaccagttattattacattccacatccccatcaaattcaaatgcaggtcctgct
aaatcctattgttcattggtggtcactccccaaaaaaatgtcaatgcagatacagaatct
gtcttgaatttgagtgtcaattctcatacccagaaaaagagagagcctttattacggtca
acattaattaaccttacccaaccgggagaattcgatgctcctgctcccagaagtctggga
catgttagttttatggcaagttccacaacaaataaagatgcaaataatagaactgaattt
ggtttggagactagccatcctcaaaatgaattcatgatgtcttcaagtcatgttatggac
aagagactgcaaattctttgctcactctgcaggaatccattgggccttcctgagaaccat
ttatatgttagttgctccataacatcctcatcaaaagtccaattgacaactcttttgaaa
aaaaggtctggagatcctgctgagaatacatcgaccagtgttcctgttgcgatatctgat
atatcatcagttgatcagcggctctgtaatagagcttatgagggcgctgcaggacaggga
atttggtgtagagaagatggatgtgtattcaatactgtgttctgccccttctgcagtaac
cctggcaattgtcttggtgtacaggtcatggcaactgatgcatcaaatgttcaattactt
aacaagatattgttttatcttgatcgtttggaaataaagaatcttgaagcatcaaaggaa
aaggatttaccaccagttcgtggctcaagtgtaggtaattgtgcagttcccatgtcaatt
gagaaattctcatacatcccacctcagcagaactctgaaggttggaggactacaaaatca
aggcagatgcgattgccaaagaaagggctgcttcctaccacaggggactga
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