Camellia sinensis (tea plant): 114307624
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Entry
114307624 CDS
T07364
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114307624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114307624
Enzymes [BR:
csin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
114307624
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
114307624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
CbiA
AAA_22
FtsK_SpoIIIE
AAA_29
ABC_tran
DUF1611
MMR_HSR1
ATP_bind_1
SRPRB
Motif
Other DBs
NCBI-GeneID:
114307624
NCBI-ProteinID:
XP_028108823
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MAFGGSAVGPPAGAGGPSAIRPVKLDKECELRIEVGPDTPLRLRLLTGTAEIFGTEIAPE
IWLTFPPRLKFAVYTWYGATIELDGTTETDYTADETPMISYVNVHAVLEGRRNRAKASPN
DSDSSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDMDIGQGTITIPGCIAATP
IEMPIDPVDGIPLEMPLVYFYGHTTPSVNADLYKVLVKELAQTLERQFAGNAESRAAGMV
INTMGWIEGVGYELLLHAIDAFNANVVLVLGQEKLCSMLKDVLKSKPNVDVVKLQKSGGV
VSRNAKVRQKARSYRIREYFYGLANDLSPHSNITRFSDLSVYRIGGGPQAPRSALPIGAE
LAANPT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggaggttcagctgtgggtccaccagcaggggcaggaggaccatcggcgata
aggccggtgaagctagacaaagaatgcgagctgagaattgaagttggtcctgacacacct
ctccgccttcggctccttactggcacagccgagatctttggcactgaaattgctcccgaa
atctggctcacctttcctcccaggctcaaattcgcagtttatacttggtatggagccaca
attgaattggatggcactactgaaactgattatacagcagatgaaacaccaatgattagc
tatgtaaatgtgcatgctgtactggaaggacgtagaaatcgtgctaaagcatcacctaat
gactctgattcttcacagggtcccagggtaattgttgtggggcctacagattctggaaag
agtaccttgtcaaggatgcttcttagttgggcagccaaacaaggttggaaacctactttt
gtggatatggatattggccaaggaactataaccattcctggatgtattgctgctacgcca
attgaaatgccaattgatccggtggatggaatccctctggaaatgcctcttgtttacttc
tacggacacacaactcctagtgtcaatgcagatttgtacaaggtgcttgtgaaggagctt
gctcagactctagagagacagttcgccggaaatgcagaatctcgagctgcaggcatggta
ataaataccatgggatggatagagggtgttggttatgagttgcttcttcacgcaattgat
gcattcaatgctaatgttgttctggttttgggtcaggagaaactttgcagcatgctgaaa
gatgtattgaaaagcaagccaaatgttgatgttgtgaaacttcaaaaatcaggtggtgtt
gtatcgaggaatgcaaaagtccgtcaaaaggccaggagctacagaataagggaatatttt
tatggccttgcaaatgatctttccccacattccaacatcacaaggttcagtgatttgtct
gtctatagaattggtggtggaccacaggccccacgttcagccctgccaattggtgcagag
cttgctgccaaccctacatga
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