Cronobacter sakazakii ATCC 29544: CSK29544_01128
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Entry
CSK29544_01128 CDS
T03903
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CSK29544_01128
Enzymes [BR:
csj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CSK29544_01128
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AKE94089
LinkDB
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Position
1207060..1208985
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AA seq
641 aa
AA seq
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MAMVSAVSVFFLFIFSVVLLFHFVQSHRYHTAMQMESIARSVRQPLSAAILKANIPEAEA
ILREIKPAGVISRADVVLPNQFQALRMRFTPERPIPVTLARVFELPVQISLPLYSLERPA
NPQPLAYLVLQADSWRMYRFIINAISTLLTTFLLLALILSVAITWCINRLILHPLRDITR
TLNALDAHELAHHQLTIPRLHKDDEIGMLVRTYNRNQQALAQQLDEVRTSGTRFPLTGLP
NQALLVALLEQAVAGGGATALLYVACEPLRDIDESQREALLRARVEKLRSVLTPRMVLAQ
ISQDDFAIIAHGVKTPEHAVTLTQQLLAALNEPPESDSGAPACAASIGVAMFDGRQSAST
LYQSAISAALDARRNGVNQAAFFGESPVSAQESAMQNALARRQYAVWLQPQVDMRNGNIV
GAEALLRERQPDGEWTLPVGLIDNIESSGLIVTVGDWVLDEACQLLARWQAHGIMLPLSV
NVSSLQLLKRDLVQTMLQRLERYAIAPGTLILEMTESQRIDDTEAAIAILRPLREAGVRI
ALDDFGMGYSSLSQLQKMKALPVDSLKIDKSFIDNLPDDDSVVAAIISMAKKLNLELVAE
GIQNEAQRDWLLNAGVTVGQGYLFGKAATPAAFEDVWLTAP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtttcggccgtttccgtcttttttctttttattttcagcgtcgttttgctg
tttcatttcgtgcagtcgcatcgctaccacaccgccatgcagatggagagcatcgcccgc
tcggtgcgccagccgctctctgcggccattctgaaagccaatattccggaagcggaggcg
atccttcgcgaaattaaacccgccggcgtgattagccgtgcggatgtcgtgttgcctaat
cagttccaggcgttgcgcatgcgctttacgcctgagcgcccgattccggtgacgctcgcc
cgcgtctttgagctgccggtgcagatctccctgccgctctattcgctggagcggcccgcc
aacccgcagccgctcgcctatctggtgttgcaggccgactcctggcggatgtaccgcttt
atcatcaatgcgatttcgaccctgctgaccaccttcctgctgctggcgctgatcctctcg
gtggcgatcacctggtgcatcaaccgcctgatcctgcacccgctgcgcgacatcacacgc
acgctgaacgcgctggacgcgcatgaactggcgcatcatcagctcactattccgcgtctg
cataaggatgatgagatcggtatgctggtgcgcacttataaccgtaaccagcaggcgctt
gcgcaacagctcgacgaggtgcgcaccagcggcacccgtttcccgctcaccggtttgccg
aaccaggcgttgctcgtcgcactgcttgagcaggccgtcgcgggcggcggtgccaccgcg
ttgctgtatgtggcttgtgagccgctgcgtgatattgacgaatcgcagcgcgaggcgctc
ctgcgcgcgcgcgttgagaagctgcgctcggtactgacgccgcggatggtgctggcgcag
ataagccaggatgatttcgcgattatcgcgcacggcgtaaaaacgccggaacacgcggtg
acgctgacgcaacagctgctggcggcccttaacgaaccgccagagtcggacagcggcgcc
ccagcgtgcgcggcaagcattggtgtggcgatgttcgatggccgccagagcgcctcgacg
ctttaccagagcgcgatttccgccgcgctggacgcccggcgcaacggcgtcaatcaggcg
gcgtttttcggcgaatccccggtgagcgcgcaggaaagcgcgatgcaaaatgcgctggcg
cgccgccagtacgccgtctggctgcagccgcaggtggatatgcgcaacggcaacattgtg
ggtgccgaagcgctgctgcgcgagcgccagccggatggcgagtggacgttaccggtaggg
cttattgataacattgagtcgagcgggcttatcgttaccgtgggcgactgggtgctggac
gaggcgtgtcagttactggcgcgctggcaggcgcacggcattatgctgccgctgtcggtg
aatgtgtcgtcattgcagttgttaaaacgcgatctagtacaaacgatgctgcaacgactg
gaacgctacgccattgcgcccggcacgctgattctggagatgacggaaagccagcgtatt
gacgataccgaagccgccatcgccattctgcgccccctgcgcgaggcgggcgtgcgcatc
gcgctggacgatttcggcatggggtattcgagccttagccagctacagaaaatgaaagcg
ctgccagtggacagcctcaaaatcgataagagctttattgataacctgccggacgatgac
agcgtggtcgcggccatcatcagcatggcgaaaaagcttaaccttgaactggtggcggaa
ggcattcagaacgaggcacagcgtgactggctgttaaacgcgggcgtgacggtgggccag
gggtatcttttcggcaaggcggcgacgcctgcggcgtttgaagacgtgtggctgacagcg
ccgtga
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