Coccomyxa subellipsoidea: COCSUDRAFT_35284
Help
Entry
COCSUDRAFT_35284 CDS
T02914
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00100
Steroid biosynthesis
csl00909
Sesquiterpenoid and triterpenoid biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
COCSUDRAFT_35284
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
COCSUDRAFT_35284
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csl01006
]
COCSUDRAFT_35284
Enzymes [BR:
csl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
COCSUDRAFT_35284
Prenyltransferases [BR:
csl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
COCSUDRAFT_35284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
17044909
NCBI-ProteinID:
XP_005651444
JGI:
35284
UniProt:
I0Z8D1
LinkDB
All DBs
AA seq
347 aa
AA seq
DB search
MGKLREVLEHPDELIPLVQMAFAAKRAKVLPKDKSLAFCYDMLNRVSRSFAVVIQRLPTE
LRDAVCLFYLVLRALDTVEDDMAVPVATKVPLLRVFHEKIYDRSWKMSCGYGPYVDLMQQ
YSLVTDAFLRLKPMYQKVIADITRRMGEGMAEFIEKEVISVKDYDLYCHYVAGLVGIGLS
QLFASSQLESEEFADMEFLANHMGLFLQKTNIIRDYLEDINEEPAPRMFWPKEVWGRYTR
KLDSFKAPENSAAALGCLNELVTDALCHAPHSLAYMAKLRDQDVFRFCAIPQVMAIGTLA
LCYNNHRVFTGVVKMRRGETAKYVQQLGSMADLYEAFDHFAGSLAAQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattgagggaggttttggagcacccagatgaactgatacctttagtgcagatg
gccttcgcagccaagcgtgcaaaagtgcttccaaaagataaaagtctcgccttttgttac
gacatgctcaacagagtatcaagaagtttcgctgtggtgattcagcgcctcccaacagag
ctgcgcgatgcagtgtgcctcttctatctggtgctgagagcactggacacagtggaggat
gatatggccgtgcctgtggccacaaaagtacctctgctgcgagtgttccacgaaaagata
tacgacagatcatggaagatgagctgtggctatgggccgtacgtcgacctcatgcagcag
tattctctggttacagatgcattcctgcggttaaaacccatgtaccagaaggtgattgct
gacatcacacggcgcatgggggagggcatggcggagttcattgagaaggaggtcatcagt
gtgaaggactatgacctgtactgccattatgtggctggtcttgtgggcatcggcctgtca
cagctctttgcctcaagccagctggagagcgaggagtttgcagatatggaatttctggcc
aaccacatggggctcttcctacagaagaccaacatcatcagggattacctagaagacatc
aatgaggagcctgcgcccaggatgttctggccaaaggaggtgtggggccgctacaccagg
aagctcgactcgttcaaggcgccggagaactccgcagccgcgctgggctgtttgaacgag
ctcgtgacagatgcgctgtgtcacgcaccgcactcgctggcctacatggccaaactgcgc
gaccaggatgtgttccgtttctgcgcgatcccacaggtcatggccattgggacgctcgcg
ctgtgctataacaaccaccgcgtcttcacaggtgtggtgaagatgcgccggggagaaaca
gccaagtatgtgcagcagctgggcagcatggcggacctctatgaggcattcgaccacttc
gctggctctctcgctgcgcagtaa
DBGET
integrated database retrieval system
