Coccomyxa subellipsoidea: COCSUDRAFT_36181
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Entry
COCSUDRAFT_36181 CDS
T02914
Name
(RefSeq) beta cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00906
Carotenoid biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
COCSUDRAFT_36181
Enzymes [BR:
csl01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
COCSUDRAFT_36181
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
Trp_halogenase
NAD_binding_8
HI0933_like
NAD_binding_9
XdhC_C
FAD_binding_2
Pyr_redox_3
FAD_oxidored
Pyr_redox
FAD_binding_3
DUF6139
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-GeneID:
17041903
NCBI-ProteinID:
XP_005648449
JGI:
36181
UniProt:
I0YZT6
LinkDB
All DBs
AA seq
457 aa
AA seq
DB search
MLPRYHQSIGKVELVVAGAGPSGLAVAERVSQAGYKVCVIDPSPLAAWPNNYGVWVDEFR
AMGLDDCLDHVWDRAEVFLDSSPSGLKHLARPYGRVDRAKLKRKLLQRCVAHGVVFQEAR
VEEVVHADGSSQITCSDGTRIPGCMVLDATGHARKLVEYDKPFNPGYQGAYGILAEVESH
PFPTDAMLFMDWRDEHTASNLQMQESNRKLPTFLYAMPFSKTRIFLEETSLVARPAVPFL
ELKQRLEARMAKYGIKIKAIEEEEYCLIPMGGVLPRLPQRTLGIGGTAGMVHPSTGYMVA
RMLGAAPVLADAIVEQLCAASDAAAQSHLPPGAVTESDADRLSAAVWHSIWPVERIRQRA
FFSFGMDVLLSLDLTETRQFFAAFFALSDHHWQGFLSARLSFLELIGFGLSLFAKSSNEA
RLNLLVKGVPGLVGMLAGLTGTIGYEKRLLGKKEQIR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccagatatcatcaaagcattgggaaggtggagctggttgtggccggtgcaggc
ccatccggcttggcagtggctgagagagtgtcgcaagcaggttacaaggtctgtgtgata
gacccgtcacccctcgctgcgtggccgaacaactatggtgtctgggtcgatgagtttcga
gcaatgggccttgatgactgcttggatcatgtgtgggatagggcagaagtattcctcgac
agcagcccctctggtctcaaacatcttgcgaggccttatgggcgagtagacagagccaag
ctaaagcgcaagctgctgcagcggtgtgtggcgcacggggtggtcttccaggaggccagg
gtggaggaggtagtgcatgcagatggcagctcacaaattacctgctctgacggcaccagg
ataccgggctgcatggtgcttgatgccaccggccatgcgcgcaagctcgtggaatatgac
aagcccttcaacccaggctaccagggggcctatggaatactggcagaggtggagagccac
ccattccccacagatgcaatgctcttcatggactggagggacgagcacacggctagcaac
ctacaaatgcaggagagcaacaggaagctgcccactttcctgtacgcgatgcccttctcc
aagacgcgcatcttcctggaggagacctccctcgtggcgcgccctgcagtccctttcctg
gaactcaaacagcggctggaggcgcgcatggcgaagtacggcatcaagataaaggcgatc
gaggaggaggagtactgcctcattcccatgggcggggtgctgccgcggctgccgcagcgc
accctcggcattggtggcacagctggcatggtccacccctccacagggtacatggtggcg
cgcatgctgggagcggcgcctgttctggcggatgccattgtggagcagctgtgcgctgcc
agcgatgctgctgcgcagtcgcacctgccgcccggagccgtcacggaatccgacgccgac
cgtctctctgccgcagtttggcactccatctggcccgtggagaggatccggcagcgcgcc
ttcttcagctttggcatggacgtcctgctgagcctggacctaacagagacgcgccagttc
tttgcagccttctttgcgctctcagaccaccactggcagggcttcctgtcggcgcggctg
tccttcctggagctgataggctttggtctgtcgctgtttgccaagtccagcaacgaggcg
cgcctgaacctgcttgtcaagggggtgccaggcctggtcggcatgctggccggcctcaca
ggcaccatcggctatgagaagcggctgctcggcaaaaaggaacagatcagatag
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