Coccomyxa subellipsoidea: COCSUDRAFT_46340
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Entry
COCSUDRAFT_46340 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00052
Galactose metabolism
csl00511
Other glycan degradation
csl00531
Glycosaminoglycan degradation
csl00600
Sphingolipid metabolism
csl00604
Glycosphingolipid biosynthesis - ganglio series
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
COCSUDRAFT_46340
09103 Lipid metabolism
00600 Sphingolipid metabolism
COCSUDRAFT_46340
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
COCSUDRAFT_46340
00604 Glycosphingolipid biosynthesis - ganglio series
COCSUDRAFT_46340
00511 Other glycan degradation
COCSUDRAFT_46340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_46340
Enzymes [BR:
csl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
COCSUDRAFT_46340
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSUDRAFT_46340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
17043706
NCBI-ProteinID:
XP_005650246
JGI:
46340
UniProt:
I0Z4Y3
LinkDB
All DBs
AA seq
768 aa
AA seq
DB search
MAALKFFSVAALLSVLCVLASCNVSDVSPVRSERSFTIENNRFVKDGKPLQIISGSIHYN
RIHPAYWKDRLQRVQAMGLNTIQLYVPWNFHERSPGTFKWDGEADIERFLDIAQELGLNV
LLRPGPYICGEWDFGGFPWWLASSKARADSYQRGSNMIHQTYNYVEGGRTMKLRVNDAAY
LGHVDRFWNVLLPKMAPYLYHRGGPILMTQACCTLLQDIIENEYGFCGFNDKAYLQHLVD
TARASLGDEAVLFTTDPPNVVTMGGLYGDDVISVVDFGPGTDVNWAFTAQSVMNPFGKSP
PFCSEFYTGWLSHWGEVMANTSAGFMLQTLSDILSYANGTGSVNFYMAHGGSNFGYWAGA
NIAGSIYQPHITSYDYDCPISEAGGIGQPGIGGDNKFKLIRALIEKHTGVAPPELPPPPV
TEDYGTVELAESATLLDQLLELFPGDGIASDRPDVMEEYGQSGGLILYRTVVNATSLQSN
AVLDIGEPVRDYARVLLDGKIVGFFERSNPRKLPLPSLSTSSGEVTLDILVEALGRVNFG
CVWDYKGLVSPDVTLNGEVLTGWHIYPLQLDDLSNISYSSNPVSQPGAASFIFESEGTEL
LRTLARFAIVPGRAAAGQLRAPSAAESGPIFYRGTFSVNATETAPGIDGNLADTFVSVRG
WGKGLLWVNGFNLGWYWASIGPQEAHYIPGPLLREGDNEIVLLEVEATPLDATVRLTGQA
DFYGPSYGARRAGPARLSATPFDRSVYMPQGVTTLSQGEPASMAVLPA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctgaagtttttcagtgtggctgctttgttatctgtactatgcgtcttagcc
tcttgcaatgtttctgatgtttcaccagtacggtcagaacggagcttcaccatcgagaac
aaccgtttcgtgaaggatggcaagccactccagatcatttcggggagcattcactacaac
cgcatccatccagcatactggaaggaccgcctgcagcgtgtgcaagcaatgggcctcaac
acaatccagctgtatgtgccatggaatttccacgagcgtagcccgggcacattcaagtgg
gatggcgaggcggacattgaaaggttcctggacatcgcgcaagagctgggcctgaatgtg
ctgctgcgccctgggccctacatctgcggcgagtgggactttggtggcttcccctggtgg
ctcgcctcctccaaggcgcgcgccgattcgtaccaaagggggagtaacatgattcaccag
acctacaactatgtggagggtgggcgcacgatgaagctgcgggtgaatgatgcggcgtat
ctgggtcacgtggaccgcttctggaacgtgctgctgcccaagatggcaccctacctgtac
caccgcgggggccccattctgatgactcaggcgtgctgcacactcttgcaagacattatt
gagaacgagtacggattctgcgggttcaatgacaaggcgtacctccaacatctggtggac
actgcgcgggcttccctgggcgacgaggctgtgctgttcaccacggacccccccaatgtg
gtcaccatggggggcctctatggagatgatgtcatctcggtggtggactttgggccgggc
acggacgtcaactgggctttcacggcgcaatcggtcatgaacccctttggcaaatccccg
cccttctgcagcgagttctacacggggtggctgtcgcactggggtgaggtgatggccaac
acgagcgcggggttcatgctgcagacgctgtcagacatccttagctacgccaacggcacc
ggctccgtcaacttctacatggcccacggcggatccaacttcggctactgggcaggtgcc
aacattgcgggcagcatctaccagccgcacatcaccagctatgactacgactgccccatc
agcgaagccggcggcatcggccagcccggcatcggcggcgacaacaagttcaagctgatc
cgggccctgattgagaagcacacgggcgtggcaccgccagagctgccaccgccgcccgta
acggaggattacgggacggtggagctggcggaatctgccacgctgctggaccagctgctc
gagctgttcccaggggacggcatcgcctctgaccggccggacgtaatggaggaatacggc
caatcgggcggactgatattgtatcggactgtagtcaatgcgacctcgcttcagtcaaat
gccgtgctggacatcggcgagcctgtgcgggattatgccagggtgctgctggatgggaag
attgtgggattcttcgagcgcagcaatcccaggaagcttcccctgcccagcctctccacc
tccagcggcgaggtaacactggacattttggtggaggcgttggggcgggtgaactttggc
tgcgtctgggactacaaggggcttgtatcccctgacgtcaccctcaatggtgaggtgctg
actggatggcacatctacccactccagctggatgacctcagcaacatctcctacagcagc
aacccagtcagccagccgggcgcggcatcgttcatattcgaatccgaaggcaccgagctg
ctcaggacgcttgcgcggtttgcaattgtgcccggccgggcagctgccgggcagctgcgc
gcgcccagcgccgccgagtccggccccattttctacaggggaaccttcagcgtcaatgca
acagaaacggcgccaggcatagacggcaatctggcggatacctttgtgagcgtgcgcggg
tggggcaaagggctcctgtgggtgaacggcttcaacctgggctggtactgggccagcata
gggcctcaggaggcgcattacatccccgggccgctgctgcgcgagggagataacgaaatc
gtgctgctcgaggtggaggcaacgccgttggacgccaccgtgcggcttacggggcaggca
gacttctacgggccaagttacggcgcgaggagggcgggaccagcgcgcctgagtgccacg
ccgtttgaccgttctgtgtacatgccacagggtgtcacaacattgtctcagggcgagcca
gcttccatggcagtgctgcctgcctga
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integrated database retrieval system