Ceratosolen solmsi marchali (fig wasp): 105359679
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Entry
105359679 CDS
T06056
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105359679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105359679
Enzymes [BR:
csol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105359679
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105359679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105359679
NCBI-ProteinID:
XP_011494628
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MIRYQTGMRITAKHLDPKNLTFSVFTADDIKNLSVKKITTPDSFNVIGHPLIGGLYDPCL
GPTFDFLDPCRTCGGNVSKCPGHFGHIELPMPVVNPLFYKALRTLLKLSCLSCFTLQIPP
CAKLLLAAKLRLIHDGLFTSIEGLDQEVTLALSDMNNAETEDVSYFHNIIENYMENIYNK
ERYRINKSSNELFFDTKNANVQWHSCIDHFLKQYNGRKVCINCQKVIPKIISLKNKLMTT
RVPSNEEDSSHRVVHKLETIIIMPDQSKEFLRKLWQNEKETLKVLVSCLNNLLIENPTDI
FFFEVIPVVPPIVRPVNMLNEQIVEHPQSQVYKSIIINCLTLRNVIQAIQDGDTNQLPDA
GKLVFNSIRGNSAVEKLHNAWQDLQGNVDHLIDRDMNKTTDSTICQGLRQIIEKKEGVIR
MHMMGKRVNYAARSVITPDPYLNIDEIGIPELFATKLTYPVPVTPWNVTEIRQLILNGPN
VHPGAVMIEGEDGLIKRLSPDNYVLREAIAKRLLTMTEKANKFFHGIKIVHRHLQNGDML
LLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEG
YYIANVTHQYLVPKDGTPLSGLIQDHMIGGVKLTLRSTFFNKEDYMQLVFSALSMIQGNL
ILLAPAIIKPTPMWSGKQVISTIIINIIPPKKSLINLTGTAKIGANEWRAKKSRPWKCGT
PFTNPNDMSEAEIIIRNGELLCGVLDKKHYGATPFGLIHCVFELYGGTTSSKMLSAFGKV
FQAYLQTIGFTLGIEDILVKPKADLKRAVIINECRQIGENIHRSILEVPDNTPMEVVTAK
MEEAYRCNSKFRAQVDKSYKAALDLYTNKINKLCLPDNLIKTFPNNNLQLMVQSGAKGST
VNTMQISCLLGQIELEGKRPPLMISGKSLPSFPPYDPMPRAGGFIDNRFMTGLQPQEFFF
HCMAGREGLIDTAVKTSRSGYLQRCLIKHMEGLMVNYDATVRDSDGCLIQFSYGEDGLDI
PKSRFLNEEQFRFLIENKNAVADEDLMRRLKMSAETQTIAKHAKKIRKWTKRNGGDLLVK
RRLSEFSKFSVDNRNPNSSKNKIIDFQCGRSKAAISLMKKWIRADEETKNSYRRQCVKCP
EPLIAKYRQDTTFGILSERLEQMLEKYVSKATSFTAKLKKDELKDVLCAKVMNTFCSPGE
PVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNMTLGIPRLREILMMASKNIKTPSMEIPFK
KDIVNLEVQSTKVRLKLTKCYAANILEHIEIRKRLVQRDQYVIEYVIHIDYLPYKCYKNE
FYIQQHDAIAKTETMFFKEMFKQIKRVLKKTGANVFFQEDKKQTKNDDLKLDEEEMVSEN
NPNLGKRFDLGEMHESSDEEELAEDADATVSRSVARHKENREYEDPEESDEELEDAPDDN
PAEPTKFNEDEDEDNDVAMDWQKTEDMKYEQRKKRVIETYLHCTNYDYDTKDSQWCEFTF
ELPIQMSKFDMPMILRNVANKLVFWETPCIKRAFIIENQNGEQILKTDGINIVEMFKYDK
ILDLCRLYTNDIYAVSQTYGIEAAYKVVIKEIKDVFKMYGIVIDTRHLSLIADYMTFEGT
FQPLSRKGMEDSTSPLQQMSFESSLNFLKNATLQGKRDNLSSPSSRLMVGQPCKSGTGSF
SLLVDIQQQIDQSNS
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgattagatatcaaacagggatgagaataacagccaagcatctggatccaaaaaatcta
actttctcagtttttaccgcagatgatattaaaaatttaagcgtaaaaaaaataacaact
cctgattcctttaatgtaattggacatcctttaatcggaggattgtatgatccttgttta
ggtccaacatttgattttttagacccatgtagaacatgcggtggtaatgtttctaaatgt
cctggacattttggacatatagaattaccaatgcctgttgtaaatccattattttataaa
gcattacgaactttattaaagttatcgtgtttaagttgtttcacattacaaattcctcca
tgtgccaagttattactagcagctaaattaagacttatacacgatggtttatttacttca
atcgaaggattagatcaagaagttacattagctttatcagatatgaataatgcagaaact
gaagatgtttcatattttcacaatattattgaaaattacatggaaaatatttataataaa
gaaagatatagaataaataagtcttcaaatgaattattttttgatacaaagaatgctaac
gtgcagtggcatagctgtatagatcattttttaaaacaatataatggtagaaaagtgtgt
atcaattgtcaaaaagtaataccaaaaattattagtttaaaaaataaattaatgaccacg
agagtgccatcaaacgaagaagatagttcacatcgggttgtacataaattagaaacaatt
attataatgccagatcaatcgaaagaatttttaagaaagttatggcagaatgaaaaagaa
acgttaaaagtattggtttcgtgtttgaacaatttattaatagaaaatcctacggatata
ttttttttcgaagttattcctgttgtgcctccaatagttagaccggtaaatatgttgaac
gaacagatcgtggaacatcctcaaagtcaagtttataaatcaattatcatcaattgtctc
actctacgaaatgttattcaagctattcaagatggtgacacgaatcaactccctgacgca
ggaaagcttgtatttaacagtataagaggtaattctgctgtcgaaaaactgcacaatgca
tggcaagacttacaaggaaatgtggaccatttgatcgatcgcgatatgaataagacaaca
gattctactatttgtcaaggattacgacagattatcgaaaagaaagaaggtgtgatacgt
atgcacatgatgggcaaaagagtaaattatgctgccagatcggtcataacaccggatcca
tatttaaacatagatgaaattggtattccagagctctttgctactaaacttacatatcct
gtaccagttacaccctggaacgttaccgagataaggcagttaattttaaacggaccaaat
gtacatcctggagctgtgatgatcgaaggcgaagatggattaattaagcgtttaagtccc
gataattatgtacttagggaagctattgccaagcgacttcttacaatgactgaaaaggca
aataaatttttccatggtattaaaatagttcatagacatcttcaaaatggtgatatgttg
ttactaaatcgtcaaccaactcttcacaagcccagtattatggcacataaagctcgaata
cttaaaggagaaaagacgctgcgccttcattacgctaattgtaaagcatataatgctgat
tttgacggtgatgagatgaacgcgcattttcctcaaaatgaattggctcgctccgaaggt
tactacattgccaatgtcacgcatcagtatttagtacctaaagatggaacgccattaagt
ggtttaattcaggatcacatgataggtggtgtaaaattaacacttcgtagcacatttttc
aacaaagaagattatatgcaactcgtattttcggccctttcaatgatacagggtaattta
atattgctcgccccagctatcataaagcctacgcctatgtggtccgggaaacaagttatc
tctaccattattataaacataattccaccaaaaaaatcattgatcaatcttaccggaacc
gctaaaataggagcgaatgaatggcgagcgaaaaaatcaagaccctggaaatgtggtacg
ccatttacgaatcctaacgatatgtctgaagctgagattattattcgcaatggggaattg
ctttgtggagtacttgataagaagcattacggtgccactccgttcggtcttatccactgt
gtattcgagttgtacggtggaacaacatcgagtaaaatgttaagtgcttttggaaaagta
tttcaagcgtacttgcaaactattggattcactttgggcatcgaagatattttagttaaa
ccaaaagccgatcttaaacgtgctgtaattattaatgaatgccggcagatcggagaaaat
attcatagatcaattctggaagttccggataatacgccaatggaggtggtaacggcaaag
atggaagaagcatatcgttgcaattcgaaattccgggctcaagtcgacaaaagttataag
gccgctttagatttatacacgaataaaatcaataaattatgcttgcctgacaatctcata
aagaccttccctaataataatcttcagcttatggttcaatcaggagccaaaggctccact
gtcaacaccatgcaaatatcgtgtttgctaggccaaattgaattggaaggaaagcgaccg
cctcttatgatcagtggcaaaagtcttccgagttttccgccgtatgatccaatgccaagg
gcgggtggtttcattgataaccgatttatgacgggtcttcaacctcaagaattcttcttt
cattgtatggctgggcgcgaaggtcttatcgatacagctgtaaaaacaagtagatctgga
tatcttcagagatgcctgataaaacacatggagggattgatggttaattacgacgcgacg
gtaagggactcggatggttgtctcattcagttttcttatggtgaggacggtttggatatt
cccaagtcgcgttttttgaacgaagaacaatttcgattcttaatcgagaataagaatgcc
gtcgcggacgaggatctgatgagacgtctgaaaatgtccgccgagacccagacgatcgcc
aagcacgcaaagaaaatccgtaagtggacgaagaggaatggcggtgacctactcgttaag
cggcggctcagcgaattttccaagttctccgtcgataataggaatcccaacagcagcaag
aacaagatcattgatttccaatgcgggaggagcaaagccgcgatctccctcatgaaaaag
tggatacgcgcggacgaagaaacaaagaactcttataggagacagtgcgtgaagtgtccg
gagccactgatcgccaagtacaggcaggacacgacctttggtatattgtcggaaagactt
gagcaaatgttggagaaatacgtgagcaaagccacctcttttacggcaaaattgaaaaag
gatgagctaaaggatgtcttatgcgcaaaagtcatgaataccttttgttcgcccggcgaa
ccagtcggtctattggccgcgcagtcgatcggcgagccctcgacccagatgaccctcaat
accttccacttcgcgggacgtggtgagatgaacatgactctcggtataccacggctacgc
gagatcttgatgatggcctcgaaaaacatcaaaacgccgagtatggagattccgttcaag
aaggatatagtcaatttggaagtacagtcgacgaaggtacgacttaagctgaccaaatgt
tatgccgccaacatcctcgagcacatcgagatccgtaagaggctcgtccagcgtgatcaa
tacgtgatcgagtacgtgattcacatcgattacctgccctacaaatgctacaaaaatgag
ttctacatccaacagcacgacgcgatcgccaagacggagacgatgttctttaaagaaatg
ttcaaacaaataaagcgagtcttaaagaagacgggcgccaatgtatttttccaggaggat
aagaagcaaacgaagaatgacgatttgaaattggacgaggaggagatggtgtccgagaac
aatcctaatttaggaaagagattcgaccttggagagatgcacgagtcgtcggacgaggag
gagctcgccgaagatgcggatgcgaccgtgtcgaggtcggtcgcgcgtcacaaagagaat
cgggaatacgaggatccggaggagagcgatgaagagttagaggacgcgcccgacgataat
ccagctgagccgactaagttcaatgaggacgaagacgaagacaacgacgttgcaatggat
tggcaaaagacggaggatatgaaatatgagcagaggaaaaaacgcgttatcgagacttac
ctgcactgcaccaattacgattatgacacgaaggacagccaatggtgcgaatttacattt
gaattacccattcaaatgtccaagtttgatatgccaatgatacttcgtaatgttgcgaac
aaattggttttctgggaaacaccctgcataaagagagcatttataatcgaaaatcaaaat
ggagaacaaatattaaagacagacggcatcaatattgtggagatgttcaaatacgataaa
attttagatttgtgtagattgtataccaatgatatttatgccgtatctcagacttacggc
atcgaggcggcatacaaagttgtcattaaagaaattaaagatgtatttaaaatgtatgga
attgttatagatacaagacatttgtcgttgatagcggattacatgacgttcgaaggcact
ttccaacctcttagccgtaagggcatggaagattcaacttcgccacttcaacaaatgagc
ttcgaaagctctcttaattttttaaagaatgccacccttcaaggtaaacgtgataattta
tcttcaccctctagccgtctgatggtgggtcaaccttgtaaatctggtaccggctcgttt
tcgttattggtagacattcaacaacaaatagatcaatcaaattcctaa
DBGET
integrated database retrieval system
