Ceratosolen solmsi marchali (fig wasp): 105366379
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Entry
105366379 CDS
T06056
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03440
Homologous recombination
csol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105366379
03460 Fanconi anemia pathway
105366379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csol03400
]
105366379
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105366379
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105366379
FA (Fanconi anemia) pathway
Downstream FA components
105366379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
DUF3489
AAA_30
Motif
Other DBs
NCBI-GeneID:
105366379
NCBI-ProteinID:
XP_011503103
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MIFIACFTVLFVCVFYSHKHLKSAINKLGLNNRRLTAFEKDKSINTEEMSDEEFRDPLAA
TNHWNKTKAKRKFVPDKASVFRWNKTAKVSEKIENDTKTPKTIESSIEISNDESEVNVSD
DSAIKESPCKNNFINNDLSVNDSSLEQSTSINNRNFQLEKQIDKVKSFKKYEKNYNNIPL
PAGMPPIIAGVPVMFPITPYKSQISVMNAVIKGCKNNENCLLESPTGSGKTLALLCAALA
WQAHFVKAASTSRTVVRIRSNEGQPSHARDLPRRTERLSELTYIICAAGCDFLQHRRRMH
MAVIIKNAMLNAHYTLSEYITSLQDDKNPKENVKLRIPRIFYSSRTHKQIEQVIREFKKT
AYAHIPMTVLSSREHSCIQSFSKGISKTQLCNDLLDPRNKGECIYYNNKHKIGTHTELSQ
HGFETPWDIEDLVELGREKKACPYFAAKSLMLDSHIIFSDILLIVSHYRFNQMQINLTGD
VVIIDEGHNIEDICREIGSYIFREDHLNEAIKDCNTVYRARPNKAYDSISQYLTTLNTLI
SDQDLQSPINPYEETTSTFWNGEETWMLFNTYKLADDAYSEFISDSEQAISDYRAMKEDM
KLPSRKKDNVAITTINFATVKLLEQLKDALNYVKSPESNMSYRCTISQAHHQESKVSDGL
WTRVKDGKRLRSLKFMCMNAAVVFDKLRKGTRCLILASGTLSPTTSFEGELGTRFLHKVH
ANHVIAKDQVYVRAIPRGPTGVKLRATYQNIQTLPFKDDLGKLIGEVCQCIPHGILCFFS
SYSALRSNVERWQDTDQWEDFFRCKRVFVEPRQHHELEETMGEYREAVDSGGALLLAVFR
GKVAEGIDFSDNFARCVITIGIPFAVQNDPEVKLKREYNDVNQDKGLLLGREWYTVQAYR
ALNQALGRCIRHKNDWGAILLVDERLQSKESDSYLSKWIREMKRHASDYNLREELQDFVK
RQRMLENENP
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatatttatcgcttgttttaccgtgctgtttgtttgtgttttttattcgcataaacat
ttgaagtcggcaattaataaattaggattaaataataggcgtttaactgcttttgagaaa
gacaaatcaataaatacagaggaaatgagtgatgaggaatttcgtgatccattagcagcg
actaatcattggaataaaactaaagctaaaagaaaatttgttccagataaagcaagtgtt
tttcgttggaataagacagctaaagtatcagaaaagattgaaaatgataccaaaacacct
aagactatcgaatcatcgattgagatatccaatgatgagtcagaagtaaatgttagcgat
gatagtgctattaaagaatcaccttgtaaaaacaatttcattaacaacgatttgtcagtt
aacgattctagtcttgaacaatcgacatcgataaataatagaaatttccaactggagaag
caaatagataaagtgaagtcatttaaaaagtatgaaaaaaattataacaatattccattg
ccagctggtatgccaccgattattgctggggttccagttatgtttccaattacaccttac
aagagtcaaatatcggtaatgaatgcggttattaaaggatgtaagaacaatgaaaattgt
ttattagaaagtccaactggtagtggtaaaacattggctttgttgtgtgctgctctggct
tggcaggcacattttgttaaagctgcgtcgactagcaggacagtcgtcaggattcgttcc
aacgaaggtcaaccgagtcacgcacgagatcttccgagaaggactgagcgattatccgag
ttaacttacataatttgcgctgctggctgcgattttctacagcaccgaaggcgaatgcac
atggcagtgataattaaaaatgcgatgctcaacgctcattatacgctatcggagtacata
accagcttgcaggatgataagaacccaaaggaaaacgtcaagctacggatcccaagaata
ttctacagctcgcggactcataagcaaattgaacaagttattcgagaatttaaaaaaacc
gcctatgcacacataccgatgactgtattgagtagcagggagcattcgtgtatacagtcc
ttctcaaagggtataagtaaaacccagctgtgcaacgatctacttgatcctcgaaacaaa
ggcgagtgtatttattacaacaacaagcacaagatagggacgcacaccgaattgagtcag
catggcttcgagaccccttgggacatcgaagatcttgtggagcttggcagggaaaagaaa
gcctgtccctacttcgccgcgaagagtctcatgctggattcgcacatcattttctctgat
attctccttatcgtttcgcactatcgtttcaatcagatgcaaatcaatttaacgggcgat
gtcgttatcattgacgaagggcacaatatagaagacatctgtcgagaaattggaagttat
atttttcgagaagaccatttgaacgaagctattaaggattgtaatacagtttatcgggca
aggccgaacaaagcctacgactccatatctcaatatcttaccaccttgaacactttaatt
agcgatcaagacttacaaagtccgataaacccgtacgaggagacgacgagcaccttttgg
aacggcgaggaaacttggatgctcttcaatacctacaaactggccgacgatgcctactcg
gagttcataagtgattccgagcaggcgatctccgattacagagcgatgaaggaagatatg
aaattaccgagcagaaaaaaggacaatgtcgccatcaccaccatcaacttcgcgacggta
aagctgctcgagcaattgaaagacgccctcaactacgtcaagagtcccgaatccaatatg
agctatcgctgcaccatctcccaggctcatcatcaggaatccaaggtctcggatgggttg
tggacgagagtaaaggatgggaaacgactgcgcagcctcaagttcatgtgcatgaacgca
gcggtggtgttcgataaactcaggaaggggacgcggtgcctgattctggcctcgggcacc
ctctccccgactacgagcttcgagggtgagcttggcactaggttcctccacaaggtccac
gcgaaccacgtgattgccaaggatcaagtgtacgtgagggcgataccacgagggcctacg
ggtgttaagctcagggctacctaccaaaacatccagacgctacccttcaaggacgacctg
gggaagctgattggcgaggtgtgccagtgcattccacacggcatcctttgcttcttctcc
tcgtattcggcgttgcgctctaacgtggagcgctggcaggacactgatcagtgggaggat
ttcttcaggtgcaagcgcgtgttcgtggagccgcgacagcaccacgagctcgaggagacg
atgggcgagtaccgagaagccgtggacagcggtggcgctctcctcctagccgtcttccgt
ggcaaggtcgccgagggcattgacttcagtgataatttcgcacgatgcgtcatcaccatt
ggtattcccttcgccgtacaaaatgatccagaagtgaaactaaagcgcgaatacaacgat
gttaatcaagataaaggtttgctgttaggaagggaatggtacaccgtgcaggcttacaga
gccttaaatcaggcgcttggaaggtgcattaggcacaaaaatgattggggagctatttta
cttgtcgacgaaagattgcaatctaaggaatcagacagctacttatccaaatggatacga
gaaatgaaacgtcatgcatcagattataatcttcgtgaagaattacaagactttgttaaa
cgacagagaatgctagaaaacgaaaatccttga
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integrated database retrieval system
