Clostridium scatologenes: CSCA_2298
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Entry
CSCA_2298 CDS
T03803
Name
(GenBank) permease
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csq02000
]
CSCA_2298
01504 Antimicrobial resistance genes [BR:
csq01504
]
CSCA_2298
Transporters [BR:
csq02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CSCA_2298
Antimicrobial resistance genes [BR:
csq01504
]
Gene variants
Tetracycline resistance genes
Transporters
CSCA_2298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
PUCC
Motif
Other DBs
NCBI-ProteinID:
AKA69423
UniProt:
A0A0E3JNL4
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All DBs
Position
complement(2499070..2500305)
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AA seq
411 aa
AA seq
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MSIFRSYKELNTEQSIDKKALIFGIISMFLCGLGFTIAAPVIPFLVKPYISNPGDQAIVV
TLLTSVYAVCVFFAAPVLGALSDKYGRRPVLLICLLGSSVGYLVFGIGGALWILFAGRII
DGITGGDISTILAYFADIIPPDQRTKYFGWASAVVGVGTVIGPTLGGLLAKFGYSVPMYF
GAIITILNVVYGFFFMPESLHRNNRLKEITFVRLNPFTQLVSILSIKNLKRLLVSAFLLW
IPNGSLQAVFSQFTMDTFNWKPAIIGLMFSIMGFQDIISQSLIMPKLLIKLSDKQIAVLG
MASEIIGYGFIAASALLSFYPIFIAGMFIFGFGDSIFGPSFNGMVSKSVDSSEQGRIQGG
SQSIQALARMIGPIIGGQIYVALGHAAPAFMGMILTAAAILVLYEGIHVNK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatttagatcatacaaagaactgaacacagaacaatccatagacaaaaaggct
ttaatatttggtatcatatctatgtttctttgtggattaggctttactatcgcagcacct
gtgattccattcttagttaagccatatataagcaatcctggagatcaagctatagttgtt
acgctgcttacctctgtttatgcagtctgcgtgttttttgcagctccagtacttggagct
ttgagtgacaaatatggtcgtcgcccagtacttttaatatgccttttgggttcatcagtg
gggtacttagtttttggtataggaggagcgttatggatactatttgctggacgcataata
gatggtataacaggtggggacataagcactattttagcatactttgcagatatcattcct
ccagatcagagaactaaatactttggatgggccagtgcagttgtgggtgttggtactgtc
attgggccaactttaggtggattacttgctaagtttggttattctgttccaatgtatttt
ggagcaataataactatattgaatgttgtttatggattcttttttatgcctgagagcctt
cataggaataatagactgaaagagattacttttgtaagactgaatccatttacacagctt
gtaagcatactttctataaaaaacttaaaaagactgcttgtatcagcattcttactttgg
atacctaatgggtctctgcaggcagttttttcacaatttacaatggataccttcaattgg
aagcctgcaataattggacttatgttttcaattatgggatttcaagacataatttcacaa
agcttaataatgccaaagcttttgataaaactcagtgataaacagatagcagtccttgga
atggcttcagagattataggctacggttttattgcagcatcagctttgctctcattttat
cctatttttatcgctggaatgtttatatttggttttggtgattccatatttggtccttcc
ttcaatgggatggtctccaaatctgtggattctagtgaacaaggaaggattcaaggaggc
agccaatctattcaagctttagcaagaatgattggacctatcattggaggtcaaatatat
gtagcacttggacatgctgcacctgcttttatgggtatgatccttacagcagcagcaata
ctagttttatatgaaggtatccatgtaaataagtaa
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