Clostridium saccharoperbutylacetonicum: Cspa_c12960
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Entry
Cspa_c12960 CDS
T02467
Symbol
rsmD
Name
(GenBank) rRNA methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csr03009
]
Cspa_c12960 (rsmD)
Enzymes [BR:
csr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Cspa_c12960 (rsmD)
Ribosome biogenesis [BR:
csr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Cspa_c12960 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
Met_10
MethyltransfD12
MTS
PrmA
Methyltransf_15
Methyltransf_25
N6-adenineMlase
TRM
Methyltransf_16
UPF0020
DnaB
N6_N4_Mtase
Methyltransf_24
RsmJ
Motif
Other DBs
NCBI-ProteinID:
AGF55068
UniProt:
M1MFB3
LinkDB
All DBs
Position
1429419..1429976
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AA seq
185 aa
AA seq
DB search
MRIIAGKARGHKLIPPATMETRPTLDRVKEAMFSSIQSYIPEAVVVDVFAGTGSLGLEAA
SRGASEVYLFDKSSTTFPLLKQNVDNLRFQDFCFPINTDAYSGLKKLADKGKKFDIIFID
PPYCKEMIPEAMKIIKENKMLKEDGIIVTKIDTIEEIYDGYEDINLIKNKKYGNTTVCYY
KYEEK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagaataatcgcaggaaaagcaagagggcataaattgatacctccagctacaatggaa
acaaggcctacattagatagagttaaggaagctatgtttagctcaattcaatcatatata
ccagaagctgttgttgttgatgtttttgcgggaacaggaagtttgggattggaggctgca
agcagaggagcaagtgaagtttatttgtttgataagagttcaacgacatttcctctatta
aagcaaaatgttgataatctcagatttcaagatttttgctttccaataaatactgatgca
tattcaggacttaaaaaattagctgataagggcaagaaatttgatattatatttatagat
ccaccttattgtaaagaaatgattccagaagctatgaaaattataaaggaaaataaaatg
ttaaaagaggatggaataatagttactaaaatagatacaattgaagaaatatatgatgga
tatgaagatataaatttaattaagaacaagaaatatggaaatacaactgtatgctattat
aagtatgaggagaaataa
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