Collinsella stercoris: LK434_08275
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Entry
LK434_08275 CDS
T07953
Name
(GenBank) discoidin domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00052
Galactose metabolism
cstc00511
Other glycan degradation
cstc00600
Sphingolipid metabolism
cstc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LK434_08275
09103 Lipid metabolism
00600 Sphingolipid metabolism
LK434_08275
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LK434_08275
Enzymes [BR:
cstc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LK434_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_N
F5_F8_type_C
Glyco_hydro_2_C
Big_4
DUF4982
Glyco_hydro_2
BetaGal_ABD2
Invasin_D3
BetaGal_gal-bd
Trypan_PARP
Gram_pos_anchor
C3_CUB2
Motif
Other DBs
NCBI-ProteinID:
UEA45120
LinkDB
All DBs
Position
complement(1963762..1968825)
Genome browser
AA seq
1687 aa
AA seq
DB search
MRLKAPISLHGACGRVARGAVAGALGAMLLATPATYCFAEGAPEVRSSSSTQMSSAEEVV
YVNTLNDPAARIQSFNENWKFNLGDAKGAEAPEFDDSTWEHVNLPHDYSIDQEYTQKGEA
ESGYKLGGIGWYRKSFTVGKELAGKRIRIDFDGVYMDSTVWVNGHKLGTHPNGYTQFSFD
LTDYIKVGEENTIVVKVNHQTPSSRWYSGSGIGRDVNLVVTDPLHVAKDGVVVSTPELSA
SNKTNVKTNFKTTVENDGKGDATFTVVSTVFPRGGEPEQKIAEATAEKTVKAGASVTVES
SANTTAAPELWGLDDPNLYTVRTQIKKDGKVVDAYYVDFGYRFFDFDPASGFSLNGEKMK
IKGVCMHHDQGALGSVSTRDAIERQVKILKDMGCNAIRTSHNVPAKELIEVCNEQGMLLD
VEFFDGLAWPKNGNGNDYARFFNQKMGESELVGADANKTWAQFDLEQSIARDVNSPAVIM
WSLGNEMSESAAGYNQSDARAILQNMVKWAKAADPTRPVTTGDNKMKGDAGNTVLNSDVI
GDAGGVVGLNYATSANYQSVHKAKPNWCLIGSETASATNSRGVYSTKANNSLVNKLLTSY
DKSKVGWGAYASEAWFDIITNDFMAGEFVWTGFDYLGEPTPANGTNAGAQGAWPSPKSSY
FGIIDTAGLPKDSYYLYQSQWNDNVNTLHMLPAWNEDVVVKTGDKKNVEVVVYTDAPQVE
LFFTPAKGGNPQSLGKKALTKVTTDGGYSYRVYKGEDGTKTPTHSDLYLTWEVPYADGTI
TAKAYDDQGKELSTESWDGRKSVTTAGPAKKLRATASRTKMTGNGTDLAYITVDVTDENG
VIVPDATNKVSFKVEGAGALAGIDNGVQADHHSYRDSSRAAQAGQLVGIVRAGKSAGEVK
VTVSADGLEPTSVTIPVAAAPGNPDAGKQIDSFFYSKNYYVKAGSALELPTQIEVRYTDG
SSSEQPVEWQAVSNDQLSKPGSFSVSGTVCGLPVSANVTVLTEVAALLNYSTTTQVASPA
VLPQGRPAVLDDGTILNASFPVTWKTPGDDAYAQPGNVTVEGTANVFGKDLAVQATVRVQ
EGEVKLGSSVTKDAKLSQSVPESQTSDTLDAIKDGKTEIGSNSSGGRNETCWSNWQYSQN
GNNKASITFRYDTQRVFGKINVFFGRDNASGTYPDADTTTFEVSETGAEGSWRTLDVKET
IDAAESSTNVKKYSYEFTPTTATFVRMNVTNASEHKARASKPCTMVTEVELIEATTSYPV
NGTAELAKLAVNGQELSAAVLASGEFSTRALTAEVVAEPKDNAAMTVLPAHDNKIKILLE
SEDHAKSSVFTINLAADVDSGDALANDDASRDYPVEKMTKNTAGSEHKPATSGEGPIGLA
FDKDVNTKYHSHWDGGAQKDMWVQMELPEPATIEALRYLPRQDASDNGTVTGYRIQYSEN
GSDWKDAASGSWERDKGWKVAQFDAPVTAKYFRFEGTETYADNGKVYMSAAEIRLRQPAQ
KIDISDAAQVSVEVPERVVVESASEEHPVDALALDEKLTCDGKDLVYGVDYLMTFENNTA
PGTATVTIEGIGAYSGTVTREFTIEVEPPVDPEPPVDPEPPVDPEPPVDPEPPVDPEPPV
DPEPPVDPEEPNDPKPPVSNGDAGASGSGSTSGLPQTGDPTALVAGSLAAISMASIALGR
ARRKRDE
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaaagccccaatctcgctgcatggagcatgcggacgggtcgcgcgaggcgcc
gttgcgggcgcattgggcgccatgctgctcgcaactcctgcaacgtactgctttgccgag
ggcgcgcccgaagtccggtcgagctcgtcgacgcagatgagctccgcggaggaggtcgtg
tacgtcaacacgctcaacgaccctgccgcgcgcatccagagctttaacgagaactggaag
ttcaacctgggcgatgcgaagggggcggaggcgcccgagttcgacgactccacttgggag
catgtgaatttgccccacgactacagcatcgatcaggagtacacgcaaaagggcgaggcc
gagagcggttacaagctgggcggtatcggttggtaccgcaagagcttcaccgtgggcaag
gagcttgcgggcaagcgcatccgcatcgacttcgacggcgtgtacatggattccacggta
tgggtcaacgggcataagctcggcacccaccccaacggctacacgcagttctccttcgac
ctcaccgactatataaaggtgggcgaggagaacaccatcgtcgtcaaggtcaaccatcag
acgccttcgagccgctggtattccggctccggcatcgggcgcgatgtgaacctggtcgtg
accgacccgctgcacgttgccaaggacggcgtcgtggtgagcactccggagctctccgct
tcgaacaagacgaacgtcaagacgaatttcaagacgacggttgagaacgacggcaagggc
gatgccacgttcaccgtggtaagtacggtgttcccgcgcggcggtgagcctgagcagaag
atcgccgaggcaacggctgagaagaccgtcaaggcgggtgcgtccgtcacggtcgagtcc
tccgccaacaccactgcggcccccgagctgtggggccttgacgacccgaatctttacacg
gtgcgcactcagatcaagaaggacggcaaggtcgtcgatgcgtactacgtcgacttcggc
taccgtttcttcgacttcgatcccgccagcggtttttcgctgaacggcgagaagatgaag
atcaagggtgtttgcatgcaccacgaccagggcgcgctgggatcggtctccacgcgcgat
gcgatcgagcgccaggtcaagatcctcaaggacatgggctgcaacgccatccgcacctcg
cataacgttcccgccaaggagctcatcgaagtatgcaacgagcagggtatgctgctcgac
gtcgagttcttcgatggcttggcatggcccaagaacggcaacggcaacgattacgcccgc
ttcttcaaccagaagatgggtgaatccgagctcgtgggcgccgatgcgaacaagacgtgg
gcgcagttcgacctcgagcagtccatcgcgcgcgatgtgaactccccggccgtgatcatg
tggtcgctcggcaacgagatgagcgagagcgctgccggctacaaccagtctgacgcgcgc
gctattttgcagaacatggtcaagtgggccaaggctgccgacccgacgcgtccggtgacc
accggcgacaacaagatgaagggcgacgccggcaatacggtgctgaactccgacgttatc
ggcgatgccggcggcgtggttggcttgaactacgcaacgagcgctaactaccagtctgtc
cataaggctaaacccaactggtgcctcatcggctccgagaccgcttccgccaccaacagc
cgcggcgtgtacagcaccaaggcgaacaactcccttgtcaataagctgctgacctcgtac
gacaagtccaaggtcggctggggcgcctacgcgtccgaggcgtggttcgacatcatcacg
aacgacttcatggcgggcgagttcgtgtggacgggctttgactacctaggtgagcccacg
cccgccaacggcacgaacgccggcgcgcagggcgcttggccttcgcccaagagctcgtac
ttcggcatcatcgacaccgccggcctgcccaaggactcctactacctgtaccagtcccag
tggaacgacaacgtgaacaccttgcacatgcttcccgcatggaacgaggacgtggtggtc
aagactggcgacaagaagaacgtcgaggtcgttgtctacaccgacgccccgcaggtcgag
ctcttcttcacgcccgcgaagggcggcaatccgcagtccctgggcaagaaggccctgacc
aaggtgaccacggatggcggctacagctaccgcgtgtacaagggcgaggacggcaccaag
acacctacgcactccgatttgtacctcacatgggaagttccctacgccgacggcaccatt
accgcaaaggcctatgacgaccagggcaaggagctttccacggagagctgggacggccgc
aagagcgtgaccaccgcaggccccgccaaaaagcttcgtgccaccgcgagccgcaccaag
atgaccggcaacggcaccgacctcgcctacatcacggtggatgttaccgatgagaacggc
gtcattgtccccgacgctaccaacaaggtgagcttcaaggtcgagggcgcgggtgccctg
gccggcatcgacaacggcgttcaggccgaccatcattcctatcgcgattccagccgcgcc
gctcaggcgggccagctggtgggcatcgtccgcgcgggcaagagcgcgggcgaggtgaag
gtcaccgtgagcgcggacggcctggagccgacgagcgtcacgatccccgttgccgccgct
cccggcaacccggatgcgggcaagcagatcgacagcttcttctactccaagaactactac
gtcaaggccgggtcggcgctcgagctgcccactcagatcgaggtccgctacaccgacggc
agctccagcgagcagccggtcgagtggcaggctgtttccaacgaccagctctccaagccc
ggctccttcagcgtgagcggcacggtttgcgggcttccggtgtccgccaacgtgacggtg
ctcaccgaggtcgccgcgctcttgaattattcgaccacgacacaggtggcatctcctgcc
gtgctgccgcagggccgtcccgcggttctggatgacggcacgatcctcaacgcgagcttc
cccgtgacgtggaagacccccggtgatgatgcctatgcccagcccggtaacgtaacggtc
gagggcacggcaaacgtgttcggcaaggaccttgcggtccaggccacggttcgcgtgcag
gagggcgaggtcaagctcggctcaagcgtgaccaaggacgcgaagctctcccagagcgtt
cccgagagccagacctccgacacgctcgacgccatcaaggacggcaagaccgagatcggc
tccaacagcagtggcggccgcaacgagacctgctggtccaactggcagtactcgcagaac
ggcaataacaaggcatcgatcacgttccgctatgacacgcagcgcgtctttggcaagatc
aacgtgttctttggccgcgacaacgcctcgggaacgtaccccgatgcggacaccacgacg
ttcgaggtgtccgagacgggcgccgagggcagctggcgaacgctcgacgtcaaggagacc
atcgacgccgccgagtcctccacgaacgttaagaagtacagctacgagttcacgcctacg
actgcgacgttcgttcgcatgaacgtgacgaacgcgtccgagcacaaggcgcgcgcttcc
aagccctgcaccatggtcaccgaggtcgagctcatcgaggcaaccacctcctacccggtg
aacggcaccgctgagctcgcgaagctcgcggtgaacggccaggagctgagcgccgccgtt
ctcgcatccggcgagttctccacgcgcgcgcttaccgcggaggtcgttgccgagcctaag
gacaacgccgcgatgaccgttctgcctgcgcacgacaacaagatcaagatcctcctcgag
tccgaggaccacgcgaagagctctgtgttcaccatcaaccttgccgccgatgtcgacagc
ggcgacgccctggcgaacgacgacgcgtcgcgcgattacccggtcgagaagatgaccaag
aacaccgccggcagcgagcacaagcccgcgacgagcggcgagggcccgatcgggctcgcc
tttgataaggacgtcaacaccaagtaccactcccattgggatggcggcgcccagaaggac
atgtgggtccaaatggagctgccggagcctgcgaccatcgaggccctgcgctacctgccc
cgccaggacgcgagcgacaacggcacggtgacgggttaccgcatccagtacagcgagaac
ggctcggattggaaggacgccgccagcggttcgtgggagcgcgacaagggctggaaggtc
gcgcagttcgatgctcccgtcacggcgaagtacttccgctttgagggcaccgagacctat
gccgacaacggcaaggtctacatgtccgccgccgagattcgcctgcgccagcctgcccag
aagatcgacatctccgatgccgctcaggtgagcgtcgaggttcccgagcgcgtggtggtc
gagagcgcgagtgaggagcatccggtggacgccctcgcccttgacgagaagctcacctgc
gacggcaaggacctcgtgtacggcgtcgactacctgatgacgtttgagaacaacaccgct
cccggaaccgccaccgtgaccatcgagggcatcggtgcgtactccggcacggtcactcgt
gagttcacgattgaggtcgagcccccggtcgaccctgagcccccggtcgatccggaacct
ccggtggaccccgagcccccggtcgatccggaacctccggtggaccccgagcccccggtc
gatccggaacctccggtggaccccgaggagccgaacgatcccaagccgccggtcagcaat
ggtgacgcgggcgcaagcgggtcgggttctacgagcgggctgccgcaaacgggcgatccg
actgcgctggtcgccgggtctcttgctgccatttcgatggcgagcatcgcccttggtcgc
gctcggcgcaagcgcgatgagtaa
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