Colius striatus (speckled mousebird): 104564017 Help Entry 104564017         CDS       T08355                                  Symbol BRIP1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism csti  Colius striatus (speckled mousebird) Pathway csti03440   Homologous recombination csti03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:csti00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104564017 (BRIP1)    03460 Fanconi anemia pathway     104564017 (BRIP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csti03400]     104564017 (BRIP1) Enzymes [BR:csti01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104564017 (BRIP1) DNA repair and recombination proteins [BR:csti03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      104564017 (BRIP1)    FA (Fanconi anemia) pathway     Downstream FA components      104564017 (BRIP1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 Helicase_C_2 DEAD ResIII Motif Other DBs NCBI-GeneID:  104564017 NCBI-ProteinID:  XP_010208969 LinkDB All DBs Position Unknown AA seq 1263 aa AA seqDB search MSSDVSEYTIGGVKIVFPCKAYPSQLAMMNAIVKGLNNGQHCLLESPTGSGKSLALLCSA LSWQQSLYEKAVLTSSREKEDRKPEPSLPCRCTCHSQSKSNEAATSVNRGASCSFNNSEA GSSTKPGGSLTSTECKENETLASKLSAKKRLSQCDKENDDFQVDRKRIRPLETEQQVRKR HCLAKGVQPVDALEVHHQRKNGELIVHSEKTVKITTFSPQTSSGPCTECSCSSGKETDKD ISNTKKKENGNKLFVPKIFFGTRTHKQISQITRELRRTAYSSVPMTILSSRDYTCIHPMV SGSGGNRNEMCVELLEGKHGKSCLYYHGVNKISEHYAQQSAHRMCQAWDIEDLVSLGKKL RACAYFAARELMMCADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS FGVTESQLRAAREELDFMVNNNIRQKDHEPLRAVCCSLINWLKESFSLLVERGYETSCKV WSGREMLTILHKMGITGITFPILQKHLASVLEKEEKTSVFGREELVEMPVVSPATQIVLK GLFMVLLCLFKDNSRYADDYKVALQQTYTWMNENQLDVSDTSAFLTRPKHKRSLRQKTMV HMLNFWCLNPAVAFSDLSEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRKSQIW VGTVGVGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR WMHTGLWRNLELVKTVIAEPQGGAKSDFDELLNIYYDAIKCKGEKDGALLIAVCRGKVSE GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFGTALESLDAFARR NQKGISYSSEHNSEFLRVPSNSKDLSQASQQEATIHLSPDVISKSQEQNLVSEINFSTTI SSVNPTASNQLSGVESHSHNVTQRGKHMDSAPKMPATKMETDKMNGWTNADIMKEHCCSK PLTSTPLPVAKGCMSTASSKEGNVNRAGKLIDSVNQCQSSLISEHKPNVPESCLEKDNFS VTNTEAPLAEEHPGNLQLQVEPSIEFPLAGEKSDLSKLNVSAEDEDEDESMYFTPELYDD VESEEQKIEPLVPASSTNENLVGCRKSTVTDDLFAINTSETLEVTKKMFDAGDDGRDTSL HGIMQNEGSKNSAVNNIEKTSEAEAKQIASQEKDSKKQKISLSRSRNKGVSSFLLNGTST QFL NT seq 3792 nt NT seq  +upstreamnt  +downstreamnt atgtcttctgatgtgtcagagtatactatcgggggagtgaagatcgtattcccttgcaag gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataatgggcaa cactgtttgttggagagccctacaggaagcggcaaaagcttggcattgctttgttctgca ttatcatggcagcagtctttgtatgagaaagcagtgcttacatcatcacgtgaaaaagaa gacagaaagccagagccctcactgccatgtcgctgcacgtgtcattctcaatctaagagc aacgaggctgcaacaagtgtgaatcgtggtgcttcttgttcttttaataactctgaagca ggaagctccacgaaacctggaggctcactaacaagcacagaatgtaaggaaaatgagaca ctagcttcaaaactgtctgccaaaaaaaggttatctcagtgtgacaaggagaatgatgat tttcaagtagataggaaaagaattcgtcctttggagactgagcagcaggttagaaaacgt cattgtctggcaaaaggagtgcagccagttgatgccttggaagttcatcatcagagaaaa aatggagagctgattgttcactcagaaaaaactgtgaaaatcactactttttctccccag acatcctctggcccttgcactgagtgttcctgttcttctggaaaagaaactgataaagat attagtaacacaaagaagaaggaaaatggaaataagttgtttgttcccaaaatatttttt ggaacacgaacacacaagcaaatatcccagattaccagagagctgaggagaacagcatat tccagtgtccctatgacaattctttccagccgggattatacctgtattcatccaatggta tctggtagtggtggtaacaggaatgaaatgtgtgtggagttgctggaaggaaaacatggc aagtcatgtctttactatcatggtgttaataaaatcagtgaacactatgcccaacagtct gcacataggatgtgtcaggcttgggacattgaagatttagtgagcttgggaaagaagctt cgtgcctgtgcatattttgcagccagagaactcatgatgtgtgcagatattgtattttgt ccttacaattatctcctcgacccacagatacgggagagtatggaaattaacctaaaaggc caagtagtcattttagatgaagcccataatattgaggactgtgctcgggagtcagtgagc ttcggtgtcacagaaagtcagctgagagctgctcgagaagagctggatttcatggtcaat aacaacatccgacagaaggaccatgagcccctgcgagctgtgtgctgctctctgataaac tggttaaaggagagctttagtctactagtagaaagaggatatgaaacttcatgtaaggtt tggagtggaagagaaatgctcaccattttgcacaaaatgggaataactggtattactttt cccattttacagaaacatcttgcaagtgtccttgaaaaagaagaaaaaacatcagtgttt ggtagagaagaacttgttgagatgccagttgtgagcccggctactcagattgtgttgaag gggttattcatggttctcttgtgtctttttaaagataatagcaggtatgcagatgactac aaagttgctctacaacaaacttacacttggatgaatgaaaatcaacttgatgtttcagat acaagtgccttcttgacaaggcccaagcataaaaggagtttgaggcagaaaaccatggtc cacatgcttaatttttggtgcttgaatcctgctgtggctttttcagacttgagtgaagtt agaacaattgttctgacatctggtacactctctccaatggactcattttcttcagagctt ggtgtgaagttttctattcagctggaggcaaatcatgttattcggaagtcacagatttgg gttggcaccgttggagtaggccctaatggtcggaagttgtgtgccacattccagcataca gagacctttgagttccaagatgaggtgggagcacttctgctgtcagtctgtcaaactgtt ggccaaggaatcttgtgctttttgccatcttataagctgttggataagttaaaagatcgc tggatgcacactggcttgtggagaaacctggagctggttaagacagtcattgcagagcct caaggaggggcaaagagtgactttgatgaactgctgaacatatactatgatgcaataaaa tgtaaaggagaaaaagatggagcactccttatagctgtatgcagaggaaaagttagtgaa ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccgtttcca aatgtgaaagaccttcaggttgaattaaagagaaagtacaatgaccagcacaaaaatacc aggggccttttaccaggaagtcagtggtatgaaattcaagcttacagagctctgaaccaa gctctgggaaggtgtataagacacaggaatgactggggtgctctgattttggttgacgac cgcttccggaataaccctaataaatacataactggattatctaaatggattcgtcaacaa atccagcaccatgaaaattttggtactgcacttgaatctttggatgcatttgccagaaga aaccagaaaggcatcagttattcctcagagcacaacagtgaatttctccgtgtaccttca aactcaaaagacctgtcacaagcctctcaacaagaggcaactattcatctgtcaccagat gttatttctaaaagccaggagcaaaatttggtttcagaaatcaattttagtacaactatc agctcagttaatcctacagcatcgaatcagctgagtggcgtagagagtcattctcacaat gtaacacaaagaggaaaacatatggactctgcacccaaaatgccagcaactaaaatggag acagacaaaatgaacggttggactaatgctgatattatgaaagaacattgctgctctaaa ccactgacttcaacacctttgcctgtagccaagggctgcatgtccacagctagtagcaaa gaagggaatgtgaatagggctggcaaacttattgatagtgtaaatcagtgccagtcatca ttaatttcggaacataaaccaaatgtaccagaatcatgtttggaaaaagataatttttca gtgacaaacactgaggctccacttgctgaagagcatcctggtaacctacagcttcaagtt gagcccagcattgaatttcctttggcaggagagaaatcagacctttcaaagttaaatgta tctgcagaagatgaagatgaagatgagagtatgtacttcacaccagaactctatgatgat gtagaatcagaggagcagaaaattgaacctttggttccagcctctagtacaaatgagaat ctggttggatgtcgaaaatccacagtcactgatgatctttttgcaatcaacacctcagaa acattagaagtgactaaaaaaatgtttgatgctggtgatgatggcagagacacaagttta catggaataatgcaaaatgagggaagtaagaatagtgcagttaataacatagagaagact agtgaagcagaagcaaagcagatagcatctcaagagaaggactccaaaaaacagaaaatc agtctttccagatcaagaaataaaggtgtgtcatcttttctattgaacggtactagcaca cagtttctgtag

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