Capnocytophaga stomatis: CGC58_08455
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Entry
CGC58_08455 CDS
T05529
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csto
Capnocytophaga stomatis
Pathway
csto03030
DNA replication
csto03410
Base excision repair
csto03420
Nucleotide excision repair
csto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC58_08455
03410 Base excision repair
CGC58_08455
03420 Nucleotide excision repair
CGC58_08455
03440 Homologous recombination
CGC58_08455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csto03032
]
CGC58_08455
03400 DNA repair and recombination proteins [BR:
csto03400
]
CGC58_08455
Enzymes [BR:
csto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC58_08455
DNA replication proteins [BR:
csto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC58_08455
DNA repair and recombination proteins [BR:
csto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC58_08455
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC58_08455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATA90635
UniProt:
A0A250G1M0
LinkDB
All DBs
Position
1914199..1916988
Genome browser
AA seq
929 aa
AA seq
DB search
MKKKLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFMNSLFDVIKKERPDHLAVAF
DKGGSVARTEMFTDYKANREETPEAIRIAIPYIHEILKALHIPIIEKEGYEADDIIGTLA
KQAEKQNYLVYMVTPDKDYAQLVSDNIFVYRPARNGNDVEVWGVEQVREKFEVQSPEQVI
DFLGMMGDAVDNIPGFPGVGEKTAKKLLAEFGSLENLLANTHKLKGKMKENIENNAEKGI
LSKKLATIMLDVPVEFDETDFELSKPDFEAVAKLFEELEFRQLLQNFMRTYQPPEIVAQK
STSSEGQMDLFAVQENLFAENLSSGKKTIQDTPHHYQLVDTPMARKILLSNLLQQKAICF
DTETTNLESLNAELVGIAFSWHKGKGYYVPFPENRSEASELLEEFRSFFENEQIIKVGQN
LKYDIKVLHTYGIEVKGELFDTMVAHYLINPDMRHNMDVLSETYLDYTPISIEKLIGKKG
KNQLSMRSVPLEQQKEYAVEDADVTWQLKEIFAEELKKVNADKIYHKLEAPLVKVLAKME
LEGINLDISFLKELSKKLDEDIIAYEKEILTAAGEDFNLASPKQLGEILFEKLKIDKKPK
KTKTGQYATSEEVLSYFADKHKIVADILEWRQLQKLKSTYIDALPNEVNPKTGRVHTTYM
QTVAATGRLSSNNPNLQNIPIRTERGQQIRKAFIPRDEEHVLLAADYSQIELRIIASLSE
EQNMIQAFLNKEDIHRSTAAKVFNVPIEEVTREQRSHAKTVNFGIIYGVSAFGLSNQTDL
SRTESKELIETYYATYPNLRNYINKQIFFAQQHGYVETVLGRRRYLPDINSRNQVVKGAA
ERNAINAPIQGSAADIIKIAMIRIQNRLEKEHFKTRMLLQVHDELVFDVPKTELEAVKNA
IKHEMENAFKLTVPLVVDLGVGTNWLEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaaacttttccttttagatgcgtatgctttgatattcagaggttattacgct
tttattaaaaatccgagaattaactcaaaaggattaaatacttcggcgataatgggcttt
atgaactcactttttgatgtgattaaaaaagaaagacccgatcatttagcagtggctttt
gataaaggcggaagcgttgctcgcactgaaatgttcacggattacaaagccaatcgggaa
gaaactcctgaggctattcgtattgcgataccttatattcacgaaatattaaaagcctta
catattcctatcattgaaaaagaaggttacgaagctgatgatattatcggtacgcttgcc
aaacaggctgaaaaacaaaactatttggtgtatatggttactccggataaagattatgca
caattggtttctgataatatttttgtgtatcgtcctgcccgaaacggaaatgatgttgag
gtttggggagtggagcaagtaagagaaaaatttgaagtacaatcacccgaacaagtaatt
gattttctcggaatgatgggcgatgcggttgataacattcccggatttcccggagtgggt
gaaaaaacagccaaaaagcttcttgccgagttcggaagtttggaaaatctgctggcaaat
acgcataagctgaaaggaaagatgaaagagaacattgaaaacaatgccgaaaaaggaatt
ttatccaaaaaattggcaacaattatgttagatgttcccgtagaatttgatgaaactgac
tttgagctttcaaaacccgattttgaggctgtcgccaaactttttgaggaattggaattt
aggcaattgcttcagaactttatgcgtacgtatcaacctcctgaaatagtggcacaaaaa
tcaacctcatcggaaggacaaatggatttatttgcagtacaagaaaatttgtttgcagaa
aatctatcttccggcaaaaaaacaattcaggatacgcctcatcattatcaattggtagat
acgccaatggctcgtaagatattgttaagtaatttattgcaacaaaaagcaatttgtttt
gataccgaaacaacaaatcttgaaagtttaaatgccgaattggttgggattgctttttcg
tggcataaaggcaagggatattacgttccgtttcctgaaaataggtcggaggcttctgaa
ttattggaagaatttcggtcattttttgaaaatgaacaaattataaaggttgggcaaaac
ctaaaatatgatatcaaagtattgcacacttacggaatagaggtaaaaggtgagttattt
gacacaatggtagcacattatctcattaatcctgatatgcgtcacaatatggatgtactt
tcggaaacgtatttggattatacacccatttccattgaaaaattaataggcaaaaaagga
aaaaatcagctttcgatgcgttcagttcccctcgaacaacaaaaagaatacgctgttgaa
gatgctgatgttacttggcaattaaaagaaatatttgcagaagaactcaaaaaggtaaat
gccgataaaatttaccacaaattagaagctccactggtgaaagtactcgccaaaatggaa
ttggaaggcatcaatttggatatttctttcttaaaagaactttccaaaaaattagatgaa
gatattattgcctatgaaaaagaaattctaacagctgcgggcgaggattttaacttggct
tctcccaaacagttaggcgaaattttgtttgaaaaacttaaaattgataaaaaacctaaa
aaaaccaaaacaggacaatatgccacatcggaagaagtattatcttactttgctgataaa
cacaaaattgtggctgatatcttggaatggcgacaacttcaaaagctaaaatcaacttat
attgatgcacttcctaatgaagtaaatccaaaaacgggaagagtacacacaacctatatg
caaacagttgcagccaccgggcgtttgagcagtaacaacccgaatttgcaaaacatccca
attcgaacagaaagagggcaacaaattcgtaaagctttcattcccagagatgaagaacac
gttttgttagctgcggattattcacaaattgaactgcgaatcattgcttcattaagtgaa
gaacaaaatatgattcaagcgtttttaaacaaagaagatattcatcgctcaacggctgct
aaagtctttaatgttcctattgaagaagttacacgcgaacaacgaagccacgccaaaacg
gtgaatttcggaattatttacggtgtgtcggctttcgggttgagtaaccaaaccgacctt
tcacgtactgaaagtaaggaactaattgaaacctactacgcaacatatcctaacttacgc
aattatatcaacaaacaaatattttttgctcagcaacacggatatgtggaaactgttttg
ggaagaaggcgttatctccccgacattaattcacgaaatcaagtagttaagggagctgcc
gaacgaaacgccatcaatgctcctattcagggaagtgccgccgatattataaaaattgcg
atgattcgcattcaaaaccgattggaaaaagaacacttcaaaacgagaatgttactacaa
gtacacgatgaattggtatttgatgtcccgaaaacggaattggaagcagtgaaaaatgcc
atcaagcacgaaatggaaaacgccttcaaacttaccgtgcctttggttgttgatttgggt
gtaggaacaaactggctcgaagcacattaa
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