KEGG   Capnocytophaga stomatis: CGC58_08455
Entry
CGC58_08455       CDS       T05529                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
csto  Capnocytophaga stomatis
Pathway
csto03030  DNA replication
csto03410  Base excision repair
csto03420  Nucleotide excision repair
csto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGC58_08455
   03410 Base excision repair
    CGC58_08455
   03420 Nucleotide excision repair
    CGC58_08455
   03440 Homologous recombination
    CGC58_08455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csto03032]
    CGC58_08455
   03400 DNA repair and recombination proteins [BR:csto03400]
    CGC58_08455
Enzymes [BR:csto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGC58_08455
DNA replication proteins [BR:csto03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CGC58_08455
DNA repair and recombination proteins [BR:csto03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CGC58_08455
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CGC58_08455
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 RNase_H_2
Other DBs
NCBI-ProteinID: ATA90635
UniProt: A0A250G1M0
LinkDB
Position
1914199..1916988
AA seq 929 aa
MKKKLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFMNSLFDVIKKERPDHLAVAF
DKGGSVARTEMFTDYKANREETPEAIRIAIPYIHEILKALHIPIIEKEGYEADDIIGTLA
KQAEKQNYLVYMVTPDKDYAQLVSDNIFVYRPARNGNDVEVWGVEQVREKFEVQSPEQVI
DFLGMMGDAVDNIPGFPGVGEKTAKKLLAEFGSLENLLANTHKLKGKMKENIENNAEKGI
LSKKLATIMLDVPVEFDETDFELSKPDFEAVAKLFEELEFRQLLQNFMRTYQPPEIVAQK
STSSEGQMDLFAVQENLFAENLSSGKKTIQDTPHHYQLVDTPMARKILLSNLLQQKAICF
DTETTNLESLNAELVGIAFSWHKGKGYYVPFPENRSEASELLEEFRSFFENEQIIKVGQN
LKYDIKVLHTYGIEVKGELFDTMVAHYLINPDMRHNMDVLSETYLDYTPISIEKLIGKKG
KNQLSMRSVPLEQQKEYAVEDADVTWQLKEIFAEELKKVNADKIYHKLEAPLVKVLAKME
LEGINLDISFLKELSKKLDEDIIAYEKEILTAAGEDFNLASPKQLGEILFEKLKIDKKPK
KTKTGQYATSEEVLSYFADKHKIVADILEWRQLQKLKSTYIDALPNEVNPKTGRVHTTYM
QTVAATGRLSSNNPNLQNIPIRTERGQQIRKAFIPRDEEHVLLAADYSQIELRIIASLSE
EQNMIQAFLNKEDIHRSTAAKVFNVPIEEVTREQRSHAKTVNFGIIYGVSAFGLSNQTDL
SRTESKELIETYYATYPNLRNYINKQIFFAQQHGYVETVLGRRRYLPDINSRNQVVKGAA
ERNAINAPIQGSAADIIKIAMIRIQNRLEKEHFKTRMLLQVHDELVFDVPKTELEAVKNA
IKHEMENAFKLTVPLVVDLGVGTNWLEAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
ttgaaaaaaaaacttttccttttagatgcgtatgctttgatattcagaggttattacgct
tttattaaaaatccgagaattaactcaaaaggattaaatacttcggcgataatgggcttt
atgaactcactttttgatgtgattaaaaaagaaagacccgatcatttagcagtggctttt
gataaaggcggaagcgttgctcgcactgaaatgttcacggattacaaagccaatcgggaa
gaaactcctgaggctattcgtattgcgataccttatattcacgaaatattaaaagcctta
catattcctatcattgaaaaagaaggttacgaagctgatgatattatcggtacgcttgcc
aaacaggctgaaaaacaaaactatttggtgtatatggttactccggataaagattatgca
caattggtttctgataatatttttgtgtatcgtcctgcccgaaacggaaatgatgttgag
gtttggggagtggagcaagtaagagaaaaatttgaagtacaatcacccgaacaagtaatt
gattttctcggaatgatgggcgatgcggttgataacattcccggatttcccggagtgggt
gaaaaaacagccaaaaagcttcttgccgagttcggaagtttggaaaatctgctggcaaat
acgcataagctgaaaggaaagatgaaagagaacattgaaaacaatgccgaaaaaggaatt
ttatccaaaaaattggcaacaattatgttagatgttcccgtagaatttgatgaaactgac
tttgagctttcaaaacccgattttgaggctgtcgccaaactttttgaggaattggaattt
aggcaattgcttcagaactttatgcgtacgtatcaacctcctgaaatagtggcacaaaaa
tcaacctcatcggaaggacaaatggatttatttgcagtacaagaaaatttgtttgcagaa
aatctatcttccggcaaaaaaacaattcaggatacgcctcatcattatcaattggtagat
acgccaatggctcgtaagatattgttaagtaatttattgcaacaaaaagcaatttgtttt
gataccgaaacaacaaatcttgaaagtttaaatgccgaattggttgggattgctttttcg
tggcataaaggcaagggatattacgttccgtttcctgaaaataggtcggaggcttctgaa
ttattggaagaatttcggtcattttttgaaaatgaacaaattataaaggttgggcaaaac
ctaaaatatgatatcaaagtattgcacacttacggaatagaggtaaaaggtgagttattt
gacacaatggtagcacattatctcattaatcctgatatgcgtcacaatatggatgtactt
tcggaaacgtatttggattatacacccatttccattgaaaaattaataggcaaaaaagga
aaaaatcagctttcgatgcgttcagttcccctcgaacaacaaaaagaatacgctgttgaa
gatgctgatgttacttggcaattaaaagaaatatttgcagaagaactcaaaaaggtaaat
gccgataaaatttaccacaaattagaagctccactggtgaaagtactcgccaaaatggaa
ttggaaggcatcaatttggatatttctttcttaaaagaactttccaaaaaattagatgaa
gatattattgcctatgaaaaagaaattctaacagctgcgggcgaggattttaacttggct
tctcccaaacagttaggcgaaattttgtttgaaaaacttaaaattgataaaaaacctaaa
aaaaccaaaacaggacaatatgccacatcggaagaagtattatcttactttgctgataaa
cacaaaattgtggctgatatcttggaatggcgacaacttcaaaagctaaaatcaacttat
attgatgcacttcctaatgaagtaaatccaaaaacgggaagagtacacacaacctatatg
caaacagttgcagccaccgggcgtttgagcagtaacaacccgaatttgcaaaacatccca
attcgaacagaaagagggcaacaaattcgtaaagctttcattcccagagatgaagaacac
gttttgttagctgcggattattcacaaattgaactgcgaatcattgcttcattaagtgaa
gaacaaaatatgattcaagcgtttttaaacaaagaagatattcatcgctcaacggctgct
aaagtctttaatgttcctattgaagaagttacacgcgaacaacgaagccacgccaaaacg
gtgaatttcggaattatttacggtgtgtcggctttcgggttgagtaaccaaaccgacctt
tcacgtactgaaagtaaggaactaattgaaacctactacgcaacatatcctaacttacgc
aattatatcaacaaacaaatattttttgctcagcaacacggatatgtggaaactgttttg
ggaagaaggcgttatctccccgacattaattcacgaaatcaagtagttaagggagctgcc
gaacgaaacgccatcaatgctcctattcagggaagtgccgccgatattataaaaattgcg
atgattcgcattcaaaaccgattggaaaaagaacacttcaaaacgagaatgttactacaa
gtacacgatgaattggtatttgatgtcccgaaaacggaattggaagcagtgaaaaatgcc
atcaagcacgaaatggaaaacgccttcaaacttaccgtgcctttggttgttgatttgggt
gtaggaacaaactggctcgaagcacattaa

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