Cucumis sativus (cucumber): 101209285
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Entry
101209285 CDS
T02486
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101209285
Enzymes [BR:
csv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101209285
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101209285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
101209285
NCBI-ProteinID:
XP_004141564
UniProt:
A0A0A0KSZ4
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Position
5:31818820..31829161
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AA seq
635 aa
AA seq
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MEDIEDLLIGGGGGAPPGYRLPITAVGVKPKKKNMFKSNASADDSSNEPSPIQNPLVPKI
PGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQSAMD
TLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLN
RKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVRRVRSVIN
EGVREIWLSSEDTGAYGRDIGVNLPILLNAIVSELPSDASTMLRIGMTNPPFILEHLKEI
AKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICG
FPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFE
AFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSATVKITSIGRW
SVFGEVIEIISTKHHKTTTLEDTLTQDKVSPCSNTHETCACSTEPESCACGLESCKGAVA
VGDEVNSSRNVPSPEEPKRKNLIEWVLRRRKSHVLPKREETENPIVTERKQTLAGGRLDE
WGVVDKILVGGILISTFTIFGLLFHLGSTTFSSSW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagacttgctcatcggcggcggcggcggagctccccctggttaccgt
cttccgataaccgcagtgggtgtaaagccgaagaaaaagaacatgttcaaatctaatgca
agtgctgatgattccagcaacgagccctctccgatccaaaatccacttgtacctaagatt
ccaggcacacagacaatttatgtcaaaacctttggatgctctcacaaccagagtgacagc
gaatacatggctggtcagctttcagcatttggttatttgttaagcgacaatcctgaagat
gcagacttgtggcttataaatacttgcacagttaaatcccctagtcagtctgctatggac
actctaataacaaaatgcaaaaatgcaaaaaagcctcttgtggtagctgggtgtgtacca
caaggtagtcgagatttaaaggagttagaaggggtcagtatcgtaggagttcagcagatt
gatcgcgtggtagaagttgtggaagagacactaaaaggtcatgaagtaaggctgttaaat
cgcaagacactgccagcacttgaccttccaaaagtgagaaagaacaagttcattgaaata
cttccaatcaatgttggctgtttaggtgcttgcacatattgcaagacaaaacatgctcgt
ggtcacttgggaagttacactgttgatagccttgtaaggcgtgtaagatctgtcatcaat
gaaggagtcagggaaatatggttgagcagtgaagacacgggggcctatggccgtgacatc
ggggtcaatcttccaattttattaaatgcaattgtttctgagcttccatctgatgcaagc
acaatgcttcggattgggatgacaaatcctcctttcattcttgagcacttgaaagagata
gcaaaggtcttgtctcatccatgtgtatactcctttttgcatgtgccagttcaatccgga
agcgatgcaatcttaagtgcaatgaatcgagaatatacagtcagtgagttcaggactgta
gtagataccttaactgagcttgttcctgggatgcagattgctactgatataatatgtgga
tttcccggggaaacagatgaagatttttgtgaaactatcaaccttattaaagagtacaat
ttacctcaagttcacatctcacagttctatcctcgacccgggacacctgctgccaggatg
aagaaagttccaagtgctattgtcaagaaacgaagccgtgaattgacttcagtttttgaa
gcttttacaccatataatggaatggagggcagagtggaaagaatttggataacagaaatt
gctgcagatggcattcacttggttggccataccaaggggtacatccaagtgcttgtaatt
gccccggaaactatgctgggaacttctgctacggtgaagataacatccattggaaggtgg
tctgtttttggggaagtgattgaaatcatcagtaccaaacatcataaaacaactactctg
gaagacacgctgactcaagacaaagtttctccctgctctaacactcacgaaacttgtgca
tgttccacggagcctgaatcttgtgcatgtggactggagagctgcaaaggagcagtcgct
gtgggtgatgaagttaattcctcaaggaatgtcccttcgcctgaagagccaaaaaggaag
aatctgattgaatgggtattgaggagacggaagagccatgtgctgcccaaaagggaggag
acagaaaatcccatagtaactgaaagaaagcaaacattggctggaggaagactggatgag
tggggcgtggttgataagattcttgttggtggaatactaatcagtaccttcactattttt
ggtctactgtttcatcttggatccacaacattctcctccagttggtga
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