Cucumis sativus (cucumber): 101209799
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Entry
101209799 CDS
T02486
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00900
Terpenoid backbone biosynthesis
csv01100
Metabolic pathways
csv01110
Biosynthesis of secondary metabolites
Module
csv_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101209799
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csv01006
]
101209799
Enzymes [BR:
csv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
101209799
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
101209799
2.5.1.29 geranylgeranyl diphosphate synthase
101209799
Prenyltransferases [BR:
csv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
101209799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
101209799
NCBI-ProteinID:
XP_031737098
LinkDB
All DBs
Position
2:14624972..14626700
Genome browser
AA seq
363 aa
AA seq
DB search
MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET
LTEEEGKPTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLCI
AACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLA
GDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQ
LEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNE
LGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIAY
RQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatgagtttaggtacctcctttcaatcctgctccattttcagtcaagcttct
agatccactggttatccattgaaaaggggtttgaaatcctttattatccccaaacgaagg
ttacccacttcctcaatttcgtctctctccatttgtgcagtgctaaccaaagaagagaca
ctcacggaggaagaaggaaaacccactttcaatttcaaggaatatatggttcagaaaggg
gcttcggttaatcatgctttggatgctgcggtttttcttcgagaaccattgaggattcat
gaagcgatgcggtactctttaatggctggtgggaagcgtgttcgccctgttctttgtatt
gctgcgtgtgaactcgttggtgggaatgaatccatggcgatgccggcggcttgcgcggtt
gagatgattcacacaatgtctttgatccatgacgatcttccttgtatggataacgacgat
ttgcgccgaggaaaacccaccaatcacaaggtattcggcgaggatgttgctgttctcgca
ggtgatgcgcttttagcattcgcttttgagcatatcgctgtatcgacgatcggcgtatcg
ccgccgcggattgttcgggcgattggagagctggcgaagtcgatcggggctgaggggctc
gtcgccggccaagttgttgatattaattccgaaggggcggctgatgctgggcttgagcag
cttgagtacatccatttgcataaaaccgccgcgcttttggaagcggcggtggttcttggg
gctattctcggcggcggatcgaacgaggatgttgaaaaactgagaaatttcgcaaggtat
atcggattgctgtttcaggttgtggatgatattcttgatgttacaaaatcttcaaatgaa
ttgggtaaaactgccgggaaggatttggttgctgataaagttacttatcctaaactcatg
ggcattgaaaagtcgagggaatttgctcaaaaattgaacagagatgctcaagaacagctc
tctgggtttgatcctgataaagctgctccattgattgctttagctaattacattgcttac
aggcaaaattga
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