Cucumis sativus (cucumber): 101210755
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Entry
101210755 CDS
T02486
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101210755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101210755
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101210755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
RT_RNaseH_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
101210755
NCBI-ProteinID:
XP_004139430
UniProt:
A0A0A0LHY3
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Position
2:907294..915148
Genome browser
AA seq
1095 aa
AA seq
DB search
MQRQKSLLSFFQKSPSDNRSSDGCASSVGQRLTRFQTKPSAAGLEQPAIQTTADSSLEIR
GTDTPPEKVPRQILPVIEKNRGSSLFSSIMHKFVRVDDKRKANERDEVQKDSSQNEVGKD
SPQLPSISGKVNDPTEFSKLDVASRRHGKFDVANLNGHRGPVLNIESNEDIAGPETPGMR
PSVSRLKRSQEVSLVNCSGDSLQDSTKRIKLLQDSINLNKIHNEISDATSKFEWLNPSQV
RDANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKVGKFYELYEQ
DAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQLESAEQTKSR
GANSVIPRKLVQVTTPSTKADGDIGPDAVHLLAIKEESCGLDNNSISYGFAFVDCAALKF
WTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKVLKKYSPTGSTALELTSGSPV
TNFLEASEVKLLVQSKAYFKGSLNLWNHESTVHDDIALCALGGLINHMSRLMLDDVLRNG
DLLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHP
LKDVEEINNRLNVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSASLVLPLI
RKKLQKRRVKLFGSLVKGLRTGLDLLIQVQKEGLIISLPKVVKLPQLSGNGGLDQFLTQF
EAAVDSEFPDYQNHDVTDSGAERLSILIELFVEKATEWSEVIHALNCVDVLRSFAIIAHS
SRGSMSRPLILPQSNNSMLSPEKQGPVLKINGLWHPYALVESGETPVPNDMILGLDQDSY
HPRTLLLTGPNMGGKSTLLRSTCLAVVLAQLGCYVPCETCTLSVVDTIFTRLGATDRIMT
GESTFLVECSETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLF
ATHYHPLTKEFASHPHVMLQHMACTFKDHELIFLYRLRSGACPESYGLKVATMAGIPGRV
VEAASRASQMMKQTIKENFKSSEQRSEFSTLHEEWLKTLITVLEFKGNNLGENDAFDTLF
CLWYELKRDRITARI
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctttgttatccttcttccaaaaatctccgtccgataatcggagc
tccgatggctgtgcctcctccgtcggccagcggctcactcgctttcaaacgaaaccaagc
gcagccggtttggagcagccggctatccagaccactgcggattcctccctggagattaga
ggaaccgacactccgccggagaaggtgcctcgccagattttgccggtgattgagaagaac
agaggttcttctctcttttcaagcatcatgcataaatttgtgcgagtcgatgataaacgt
aaggcgaacgagagggacgaagttcaaaaagattcatctcagaatgaggttggaaaagat
tctcctcagttaccttccatttctggtaaggtaaatgatccgacagagttttcgaaacta
gatgtagcttctagacgtcacggtaaattcgacgttgcaaatttaaacggacatagagga
cctgtattgaatattgaaagcaatgaggacattgctggaccagaaacacctggcatgcga
ccttctgtctctcgtttgaagagatctcaagaggtttctcttgtgaattgtagcggtgat
tctttgcaagatagtacaaaaagaatcaaactccttcaggactcgattaacttgaacaaa
attcacaatgaaatttccgatgcaactagcaaatttgagtggctcaatccctctcaagtt
cgagatgccaatcgtagaaggcccgaccatcctctttatgataaaaaaacactatacata
ccacccgacgtgctgaagaaaatgtcagcatcgcaaaaacaatactggaatgtgaaatgt
caatatatggacatcttgctcttcttcaaagtggggaagttctatgagctatatgaacaa
gatgctgaaattggtcacaaggagcttgactggaaaatgacattaagcggcgttgggaaa
tgtaggcaggttggtgtacctgagagtggaattgatgaagccgttcaaaaacttgttgct
cgtggatataaagttgggagagtcgagcagttggaatctgcagagcaaacaaaaagcaga
ggtgcaaattctgtgatacctaggaaattggtacaggtgactactccatcaaccaaggct
gacggtgacattgggcctgatgccgttcatttgcttgccatcaaagaggagagctgcggg
ctggataataattcaatttcatatgggtttgcttttgtcgattgtgctgctttaaaattt
tggactggttctatcaaagatgatgcttcctgcgctgctctgggtgctctcttgatgcaa
gtgtccccaaaggaaataatatatgaagctagaggactatctaaagaaacacataaagtt
ctcaagaagtactcgcctactggctccactgctctagaactcacatcagggtcgccagtt
acaaattttctagaagcttcagaggttaaacttttggtccagtctaaagcatactttaaa
ggttccttgaatttgtggaatcacgaaagcacagtccatgatgacattgctctatgtgcg
cttggaggacttatcaatcacatgtcaaggctgatgttagacgatgttttgcggaatggt
gatttactgccataccaagtatacagaggctgcctaagaatggatggacaaacaatggtt
aatcttgaaattttcagaaacaatgatgacggtggtctgtcaggtacactgtacaagtat
cttgataactgcgtgacatcatcgggaaagaggctcttaaggttatggatctgtcatcct
cttaaagatgttgaagagataaacaacagacttaatgtggttgaagaactgatggcgcaa
tctgacattatggtacttctaggtaccacctatcttcgcaagcttccagacttggagagg
ttgcttgggcagattaaggctactgtccagtcatctgcttctcttgtattaccattgatt
cgcaaaaagttacagaaacgacgggtgaaactatttgggtctctggtgaagggcctcagg
actggattggatctattaattcaagtccagaaggaaggtctcattatttctctaccaaaa
gtagttaaacttccacagctcagcggcaatggcgggcttgatcaattcctcactcaattt
gaagcagctgtagatagcgagtttccagattatcagaaccatgatgtaacggattctggt
gctgaaagactctctatactgatcgagttatttgtagaaaaagctactgaatggtctgaa
gtaatccatgccctcaattgtgtagacgtgctgagatcatttgcaatcattgctcattca
tctagagggtccatgtctaggcctctaattttgcctcaatcgaacaattcgatgttaagt
ccagaaaagcaagggccagttcttaaaattaatgggctatggcatccatatgcccttgtg
gagagtggagaaacaccagtccctaatgatatgatccttggtcttgatcaagatagctac
caccctcgtactctacttctaacaggaccaaacatgggcgggaaatccacacttctccgt
tccacttgtctagctgttgttcttgcacagttgggttgctacgtaccttgtgagacatgt
acgctctcggtcgtcgataccatctttacacgacttggtgccactgatcgaatcatgaca
ggagaaagtacgttccttgttgaatgttcggaaacagcttcagttctccaacatgcgact
caggactctcttgttattcttgatgaactcggccgaggaaccagcacctttgatggctat
gccattgcatatgctgtgtttcgccatttgatagaaaaggttaactgtagacttctattt
gctactcactatcaccctttaacaaaagagtttgcttcccatcctcacgtcatgcttcaa
cacatggcctgcacattcaaagaccacgagctcatttttctatatcgccttcgctccgga
gcttgccctgagagctatggcctaaaagtagcaaccatggctggaatcccaggacgagtt
gttgaagcagcttcaagagctagccaaatgatgaagcaaaccatcaaagagaacttcaaa
tcgagcgagcaacgatcggagttctcaacacttcatgaagagtggttgaaaactctaatc
acagtcttagagtttaaaggtaacaatctcggtgaaaatgatgcttttgatacattattt
tgtttatggtatgagcttaaaagagatcgtatcactgctaggatatga
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