Cucumis sativus (cucumber): 101214176
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Entry
101214176 CDS
T02486
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101214176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101214176
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101214176
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101214176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101214176
NCBI-ProteinID:
XP_004146776
LinkDB
All DBs
Position
6:19695725..19722310
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVKFNENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGK
PELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPI
MLKSKLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFS
DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT
TDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQ
PVMEGLGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSL
QNQDVLLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSK
QVSSAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVL
IAVGMIPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDL
EVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDG
GDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRY
RADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEP
YCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSR
HGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFV
NATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLL
HDRLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKG
METVAMPYVFKYLAAELAAMNIKMTLQLSSGAA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgaaatttaacgagaacgaagactatgaggcgttgcgcgagctgttcagacac
catatagaatcgtttgatcacctcgtcgatgccggattggagacacttatgaacagcatc
aaacccgtcgaaatttacgactcattcaccaacaaaaagcttagaatttggttgggtaag
cctgagttatacccaccacagaaggagcgcaatttgagaacaattcgggaagctcttctt
ccttatgaatgtaggcaagctaaaatttcatataccggaaagttcatggcagatgtttgt
tttcaatacgatgaaaaagctgtcataagagagaagtttaactttgggcaattccctata
atgctgaagtcaaagctttgtcacttgagaggtcttgatcccaagaagttggtctcctac
aacgaagaggcatcagaaatgggtggttatttcgttatgaacgggctggagagagttgtt
cggctattgatagcacccaaacgaaactatccaacgagcatggtgaggaattcattttct
gatcgacgggaaggttatactgataaagcagtggttataaggtgtgtaagagaagatcaa
tcttcagtaacagtcaaattatattatcttaggaatggaagtgccagacttggattttgg
gttcagggaaaggagtacttgcttcccataggggtcgtcctaaaggccctaattgacaca
actgaccatgaaatatatgcaagtctgacaagctgttatagtgacaaacatggaaagagt
aagggtgctgttggaactcagcttgttggtgaaagggcaaagattattcttgatgaagtt
cgagacctggcactttttgatcatcgtcaatgtctagatcatataggacaacacttccag
ccagtcatggaggggctgggaaaagaaaagttttctactgttgcagacgcagttcttaaa
gactacatatttgttcacctcgacaacaattatgacaagttcaatctgcttatttttatg
gcacagaaacttttctcccttatagatcagacttctgtacctgacaaccccgattccttg
cagaaccaggacgttctgctacctggtcagctaattactctttatctcaaggagaaactg
gaagactggttgcaaaaggtgaaaaagcttcttgaagatgaaattagtaatcccagcaaa
aattttgaattctgcagcttagctcatgtgaagaaggtcatggacaagaatccatcaaaa
caggtcagttcagctgttgaaaatatgttgaaaactggaagactcgttacacaaactggc
ctagatctgcagcagagagcagggtttacagttcaggcagagcgacttaatttcttgcgc
tttgtgtctcattttcgtgctgttcatcgtggagcttcctttgctggacttcgcactaca
actgtgcggaaattgctacctgagtcttggggttttctttgtccagtacacactcctgat
ggtgaaccatgcggcttgctgaatcatttaaccagcacctgcagaattacgtcacacttc
aattctcaaggaaaagttcgagacttttacaaaataaggacgtctattctgagtgttcta
attgcagttggaatgataccgtcactaccgaagcttgttcaaatgggtcttcctgatttt
cttaacgtgcttttagatggtcgaatcgttggttatatatcatccaatgaagtagagaaa
attgttgctcatttacgtcggttgaaagttttatctccccacgtgattcccgatgatctg
gaagttggatatgtacctttgagtataagtggagcatatcctggtttataccttttcaca
tctccttctagatttgtccgaccagttaaaaatctttcaatctcccctgaggataatcac
aatattgaactcattggcccatttgaacaggtatttatggaaatacgatgccctgatggg
ggtgatggtgggaggaaagatgagtttcctgcaacacatgaagaaatccatccaactggg
atgctcagtgtggttgctaatcttaccccttggtctgatcacaatcagagcccacgtaat
atgtaccaatgccagatggcaaaacaaacaatggcattctccctgcaagctattcggtac
cgtgcagatcaaaagctataccatcttcagactcctcaaacccctattgttcgtacaagc
acatatacgaaatacaacatagatgaatatccaactggcacaaacgcaatagtggcagtg
ttggcatatactggttatgacatggaggatgcgatgattctgaacaagtcttctgtggag
cgtggaatgttccatggacaaatatatcagacagaaactattgacttgtctgatcagggc
aatagatcaagtcgaagtcagaagatgtttaggaggagtaatattgatacatctgtgcga
tctatcatagatgcagatgggctgccttatgttggtcagatgatacaaccagatgagcct
tattgtagcatttatgatgaggtggctggcacaaccagaaccatgaaacttaaaggttca
gaagctgttattgttgattatgtgtctgttgatgtaaagaataagaataacccccaaaag
gtgaatatacgcttccgacgccctcggaatccaatgattggagataaatttagtagtaga
catgggcagaaaggtgtttgctcccagctatggccagatgttgatatgccattttgtgga
gctacaggaatgcgcccggatttgattatcaatccccatgctttcccttcaagaatgaca
atagcaatgttgatggagtctgtcgctgcgaagggagggtgtttaaatggagagtttgtt
aatgcaacaccgtttaggagttctgtaaacaaaacgaatgctggagatgaagagacaaac
ggcgagacacttgttgatgaacttggctccacgttaataaaaaagggatttaattaccat
ggtcttgaggtattgtacagtggagtttacggaacagagctaacatgtgaaatttttatt
ggaccggtatattatcagcgtcttcggcacatggtttctgacaaatatcaggttcgttcc
actggaactgtggatcaagtaactcggcaacccatcaaaggtagaaaaaagggtggtggt
atacgctttggtgaaatggagcgcgactcaatgctagctcatggagcatcatacttgtta
catgataggcttcatacatgttctgatcatcacattgctgatgtatgttcactctgcggc
agcgttctaacatcatcttttgtccagcccccaaagcgtgctgtgcgtgaaatagggggg
cttccccctgggaaggctcctaaaagggttacatgtcatgcttgcaaaacaagtaaaggt
atggagacagtagcgatgccttacgtcttcaagtacttggctgcagagttggcagcgatg
aacataaaaatgactctccaactaagtagtggagcagcctga
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integrated database retrieval system
