Cucumis sativus (cucumber): 101214828
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Entry
101214828 CDS
T02486
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101214828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101214828
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101214828
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101214828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
CENPH
Motif
Other DBs
NCBI-GeneID:
101214828
NCBI-ProteinID:
XP_004148776
LinkDB
All DBs
Position
1:complement(8036716..8077477)
Genome browser
AA seq
1400 aa
AA seq
DB search
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID
GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC
SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSV
KKAVSMLGILHYRARSKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFLS
NRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQAK
CLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTG
RTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLD
GSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTL
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFL
TSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHA
SMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGL
YSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRD
CDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQC
GSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLT
ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYG
DDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPEC
GCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIA
GVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT
LGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSR
SALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRN
KLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGV
DGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVL
GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLK
VRQRVSVPQQLPYGPPAILS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcacaagtggaaggtctggtgtttactaagcaaccatacattgaggatgtt
gggcctcgcaaaatcaagagcatgcagttcactaccttttcgggagccgaaattagcaaa
ttggctgaagttcaggtgtacaaaggtttatattatgatactactcggaaacccatcgac
ggcggcttgttggatccacgaatggggcctgctaataagggctgcaagtgtgctacatgc
catgccaattttggtgactgcccaggacattatggatacgtgaatctcgctctccctgtt
tttaatgttggttactttactacaatattggaaatactcaagtgcatttgcaagtcatgt
tctcgtatacttttggaagagaagctttttaaagatttcttgaggaagatgagaaatccc
aaattggaggccttgcggaaggttgatcttgtgaaaaaaatcataaaaaagtgttctacc
ttgacaactggcaataaaagcacgaggtgctcaagatgtggatatttaaatggttcggtg
aagaaggctgtatctatgttgggcatactgcattatcgtgcgagatccaaggatgctggg
gtggtatcagaggatcttagggcaccctataatgtgtctaacgatattctgaaccctttt
agagttctttgtcttttccaaaggatgtcagatgaggactgtgagttgctttttctatcc
aatagacctgagaaactcataattactaatgttctagtgcctcctatagccattcgtcct
tctgtaatcatggatggttctcaaagcaatgaaaatgatataactgagaggttaaaacga
attattcaacagaatgctagtgtcagccaagagttatcaacatcaaactcacaagctaaa
tgcctggaatcttgggatatgcttcagagcgaagttgcgcaactaataaatagtgatgtc
cgtggtattccattttcaatgcaagttagcaaaccgttggctggttttgttcaacgtctc
aaaggaaagcagggacggtttagaggaaatttgtgtgggaagcgtgttgagtttacgggc
agaactgtcatatcacctgatcctaatctgaaaattacagaggttgcagtccccatacac
atggctcgaattttaacttatccggaacgtgttaccagacacaatatagaaaagttgaga
caatgtgtcagcaatggtcctgataaatatcctggtgcaaggatgcttaggcatcttgat
ggttctatgaggtcattgatgatttcaggtagaaagcggcttgctgatgaactgaaatat
ggtgaaatagttgaacgtcatcttgaagatggagacgttgttctttttaacagacagcct
agtctacatcgaatgtctatcatgtgtcatagggtaagagttatgccttggagaacgttg
agattcaatgaatctgtttgcaatccctataatgctgattttgatggtgatgagatgaat
atgcatgttccacaaacagaggaggctcgcacagaggcaattctgttgatgggggtgcaa
aataatctatgcactcccaaaaatggggagattttagttgcttcaactcaggatttcttg
acatcatcttttctcataacaagaaaagacacattttatgaccgtgcagcattttctctt
atgtgttcttacatgggagatggcatggatttggttgacttgcctacacctgctctggtc
aaacctattgagctttggactggcaaacaattatttagtgtcctggttcgcccacatgca
agtatgaaggtttatctgaatcttacagttaaggagaaaagctacagtaaagtcaaagga
aatgaaaaagaacgagaaactatgtgtcctaatgatggatttgtctacttccgaaatagt
gagctaatatcaggccaagttgggaaggctactttaggcaatggcaacaaggatgggctt
tattctgttctacttagagattacaaggcacatgctgctgctgtttgcatgaatcgtctt
gcgaagctgagtgctcggtggataggtaaccatggtttctctattggaattgatgatgtc
caaccaggagatcaattggttaaaaaaaaacaaacaactatattggagggttatcgtgac
tgtgataagcagatcaatttattcaacacaggaaatttacctcctgaagctggttgtgat
gctgctcaaagtttggaatctaagataactcaaattttaaatggtattcgggaggccact
gcaaatgtgtgcatgcaaaacctacattggagaaatagtccgttgattatgtctcaatgt
ggctccaaaggatctcctattaacattagccagatggttgcttgtgttggtcagcagtca
gttgggggccgtcgtgcgccagatggattcattgatcggagccttccccattttcgtagg
aaagcaaaaactccggccgccaaaggctttgttgcaaattcattctacagtggcttgaca
gctacagagtttttctttcacacgatgggaggacgagaaggccttgtggatacagcggtg
aaaacagccgacactggttacatgtctcgtagattgatcaaagcactggaggacttatca
attcattacgacagctctgtacgaaatgctggtggttgtatagttcaattctgttatgga
gatgatggaatggatccagcacaaatggaaggaaaaagtggagcacctttgaattttgag
cggctgtttttgaaagccaaggctacctgtccaagtgacggaaacaaaatcctgtctcca
tcagaattttctgagacggtagaagacaggctctcaaaagatgatgcttctcctgagtgt
ggttgctctccagcatttgttggttctctcaagattttcctcaacaaatacgttgaagca
caaaaaaaatcatggggcacattgttggcagataatgaatcagctgtagacaaaagcatc
atcagtagttctgataatgacaatattgtgattcggaataaggtagtccagaatatagct
ggtgtcacacacagacaacttcaggtttttttggacacttgcttgtcccgctaccatacc
aaaaaaattgaagctggaactgccattggtgccattggagctcaaagtattggcgaacct
gggacacaaatgacattaaaaacttttcattttgcaggagttgctagcatgaacgttaca
cttggtgttccacgtatcaaagaaattataaatggagccaaaaggatcagcactccaatt
gtcactgcagcacttacgcatgatgataatgtcaatattgctcggatggtaaaagctcga
attgaaaaaacaaatctaggacagattgccaaatgcatccaaattgtaatgagttcaaga
tcagctttaatagaaatcaaacttgacatggaaaaaatcagagatgcagaactgtacgta
gatgccaatgttgtcaaacaggcaattctcgttactccaaaactgaaactgaaacatgag
catatcaatgttttggatgatagaaagttacgtgttcttcctcaagatgcagataggaat
aaacttcattttaatctacactttcttaaaaacatgcttcctggagttgttgtaaagggt
ataaaaactgtagggcgtgctgtcatcaaagaggaaaaagacaaagcaagaaacgccaaa
aagttcagtttgttggttgaaggaacgggacttcaagctgttatgggcactgagggagtt
gacgggtgtaacacaaagagtaatcacattattgaagtgcaacaagtacttggcattgaa
gctgcaaggaaatgtattattgaagagataaaatataccatggaaagtcatggaatgagc
atagacatacgtcatatgatgcttttaggagatttgatgacattcaggggtgaagttctt
ggaatcacaagatttggcattcaaaaaatggataaaagtgtactgatgcttgcttcattt
gagaaaaccgcggatcatctttttaatgcttctgtgaatggaagggatgataaaattgaa
ggagttagtgaatgcgtaatcatgggtataccaatgccgctaggcactggcatgttaaaa
gttagacaaagagtttctgtgccgcaacaattaccttatggaccacctgcaattctatct
tga
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