Cucumis sativus (cucumber): 101221676
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Entry
101221676 CDS
T02486
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101221676
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101221676
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
101221676
NCBI-ProteinID:
XP_011659369
UniProt:
A0A0A0K9C4
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Position
7:complement(18685455..18688453)
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AA seq
433 aa
AA seq
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MTIPERFHVAAVRGLVLGLTLLSSMVWCSSAAAPHYSGDFFGTRSRFLTGAAPATTTTTT
TPTAKVFNIIAHGAKADGRTDSTQAFMQAWVKACHSSGPAKVVFPPGTFLTGPLVYAGPC
DGPMTVEIQGTVKATTDISQYSSAEWILFESVTGLNLIGRGTFDGQGADTWKYNDCSKHP
QCIIPPTSIKFNKVTQGLMEGITSVNSKAFHIFVVLSHNIKINNVHIVAPGNSPNTDGVH
ISQTDVVNVTNSIIGTGDDCVSIGHGSTNINVLNITCGPGHGISVGSLGKYRDEKEVRGI
FVSNCTIRNTTNGVRIKTWAASPPGQATRITFQNIVLDKVRNPIIIDQNYGSKTKKSPSQ
VKVSDVQFKNIRGTTISPVAVSLQCSAALPCDGIKLEQIDVAFSGTHLKQPFANSCLNAK
ITTIGKQNPPACV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaccattccagagagatttcacgtcgccgccgtccgtggtttagtattagggttgaca
ttgctctcttcgatggtctggtgcagctctgctgctgcaccccattattccggtgacttc
tttggcactcgaagccgcttcctcactggagcagcgcctgccaccaccacaaccaccacc
acccccactgcaaaagttttcaatattatagcccatggtgccaaagctgatggcaggacg
gatagtacacaagcgttcatgcaggcgtgggttaaagcatgtcactcgagtggtccggca
aaggtggtattcccaccggggacgtttttgacagggccattggtgtatgccggaccgtgt
gacgggccaatgacggttgaaattcaagggactgtgaaggcaacaactgatattagtcaa
tattcatccgcagagtggattctatttgaatctgtcactgggttgaacctcattggtagg
ggaacctttgatggacaaggtgcagatacatggaaatataatgattgtagcaaacatcct
caatgcattattcccccaacctcaataaagtttaacaaggtgacccaagggttgatggag
ggtattacttcagtgaacagcaaagccttccacatattcgtggttttgagccacaatata
aaaatcaacaatgttcacatagttgctcctggtaatagcccaaacactgatggtgttcat
ataagccaaactgatgttgttaatgttacaaatagcatcattggcaccggagatgattgt
gtttcaattggccatggctccaccaatatcaatgttctcaacatcacttgtggccctgga
catggcatcagtgtgggaagccttggaaaatatagagatgagaaggaagtacgtggaatt
tttgtgtcaaattgcacaataagaaacaccacaaatggggtaaggatcaagacatgggct
gcttcacctcctggccaagcaactagaatcaccttccaaaacattgtcttagataaggtc
cgaaaccctatcatcatcgatcaaaattacggctcgaaaacgaagaaaagtccatctcag
gtgaaggtcagcgacgtccagttcaagaacattcgaggcaccacgatatctcccgttgcc
gtttccttgcagtgcagcgctgccttgccgtgcgatggtattaaattggaacagattgat
gtggcctttagtggcactcatttaaagcaaccatttgcgaattcatgtttgaatgccaag
attacaactataggaaaacagaacccaccagcttgtgtttag
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