KEGG   Cucumis sativus (cucumber): 116401612
Entry
116401612         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116401612
  09124 Replication and repair
   03420 Nucleotide excision repair
    116401612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    116401612
   03400 DNA repair and recombination proteins [BR:csv03400]
    116401612
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116401612
  RNA polymerase III system
   RNA polymerase III
     116401612
  RNA polymerase I system
   RNA polymerase I
     116401612
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116401612
SSDB
Motif
Pfam: RNA_pol_Rpb8 O-ag_pol_Wzy NLBH YycI
Other DBs
NCBI-GeneID: 116401612
NCBI-ProteinID: XP_031740209
LinkDB
Position
4:complement(3107107..3110603)
AA seq 146 aa
MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVL
SPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGSGSDLKVEVYASFGGLQM
LLKGDPIHCAKFRVDQNMFLLLRKLT
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcggggcttctatttaatgatattttcaaggtcaagtgtgtcaacccagatggtaaa
aagtatgataaagtttctagaattgaagcacggagtgagaagctttcgatgcatatgctg
ctggatgtaaatacagagatatatcctattgatgaaggtgagaagcttctgatggtcttg
tctcccacgttgaactatgatggatctcctgttaccagctataaagatcaggaagggaag
aaatctttagctgataagtttgaatacatcatgcatggtaaaacatacaaactttcagat
gaaggctcaggttcagacttgaaagtggaggtttatgcatcttttggaggactccaaatg
ctgttgaagggagatcccatccactgtgccaaattcagggtggatcagaacatgtttttg
ctccttcgaaaactcacataa

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